Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01671 ATGATGAAAGAATGTGATTTTCATTACGCTGCGAGTGTAATGCACAAACCTAAGAAACGGTTAAGGGAATTCGGTGACGCCGTTGATTGTAACCGTTACTCACTCGGTGATTCTGTAACCTTTGATCAATGTGGTTTGCGTCTTCACCGTCGGATCAACAACGGTGACTGGAACCCACCTCTCCTTCAACCACAGGTAAAACCACCTGAGATGAAGAAAAAGCCTAAGTTCATAATCAAATTCACGGGGAAGTCAAAAAACGATTCTAAATTTAAAAAGGGGGAAACAGTGGAAGTTAGCAACGACGATGAAGGTTATAAAGGTGCTTGGTTGGTTGCTACTGTTATTGACACATTAGAAAAAGAAAGGTTTGTAGTTGAATACAGAGACTTGGTAACAAATGACGATGGTACTCGACTCCTGAAAGAAGAAATTGATGCTAAGTTTATTAGGCCTTGTCCTCCTCATGTTCCGAATTTTGGTTCTTTCAAAAAGTTACAAGAAGTTGATGCATGGTACAATGATGCTTGGTGGGAAGGTGTAGTTGTTGAATTACTGAACACGACAGAGTGTTTTGTTCGTTTTATGGataatcaaatgttgaaaattgAATGTTCGAAGTTAAGACCTCATCAAGATTGGATTAATGGAAAATGGATCAAGTCTTCCAAGGAGCCAAGTGAACTAGTGAAGAAGTTCGGAGATGTGATACCAAAAGCCAACAATCTAGCCGGAAGAAAGTTAATTTTGAAATATCCAATTCCTTGTGAGAATGCAAAGCAACCTACAGCTGTAATAACAAGGACACTATACACTAGAAGAAAATTTGATTTACATTTCTACAAAGGGGAAAAGGTAGAAGTTAGAAGCGACGAAAAAGGCTATGAAGGTTCATGGTATACAGCAACTGTTGTCGATTTCTTGCATAATGGAAAGTACTTGGTGGAGTATTTGACACTGAAAACAGATGACTTAACAGAACAACTCAAAGAAGAAGTAAATGTTTCGGATATTAGACCGTCTCCGCCTGATATCGATCGTTTCTGTCGATTTGTGACACAACAAAGGGTTGATGTTTGGTATAATGATGGATGGTGGGAAGGTGTAGTATCTAATGTTGCTCATGGTTTCAATGGTTTCAAGTATATGGTTTATTTTTGGACTTCAAATGAGGAACTGGAATTTGAACATTGTTATCTTAGGCCTCATCACGATTGGATTGATGGAAGATGGATGCTCGCTTCTTCGGTATGA 1254 0.3836 MMKECDFHYAASVMHKPKKRLREFGDAVDCNRYSLGDSVTFDQCGLRLHRRINNGDWNPPLLQPQVKPPEMKKKPKFIIKFTGKSKNDSKFKKGETVEVSNDDEGYKGAWLVATVIDTLEKERFVVEYRDLVTNDDGTRLLKEEIDAKFIRPCPPHVPNFGSFKKLQEVDAWYNDAWWEGVVVELLNTTECFVRFMDNQMLKIECSKLRPHQDWINGKWIKSSKEPSELVKKFGDVIPKANNLAGRKLILKYPIPCENAKQPTAVITRTLYTRRKFDLHFYKGEKVEVRSDEKGYEGSWYTATVVDFLHNGKYLVEYLTLKTDDLTEQLKEEVNVSDIRPSPPDIDRFCRFVTQQRVDVWYNDGWWEGVVSNVAHGFNGFKYMVYFWTSNEELEFEHCYLRPHHDWIDGRWMLASSV 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01671 417 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 36 417 - -
Tsu07g01671 417 CDD TUDOR 283 340 IPR002999 -
Tsu07g01671 417 Gene3D - 79 163 - -
Tsu07g01671 417 Gene3D - 270 346 - -
Tsu07g01671 417 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 36 417 - -
Tsu07g01671 417 Pfam Agenet domain 283 343 IPR008395 -
Tsu07g01671 417 Pfam Agenet domain 94 155 IPR008395 -
Tsu07g01671 417 SMART agenet_At_2 278 346 IPR014002 -
Tsu07g01671 417 SMART agenet_At_2 161 216 IPR014002 -
Tsu07g01671 417 SMART agenet_At_2 349 408 IPR014002 -
Tsu07g01671 417 SMART agenet_At_2 89 158 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01671 Tsu-Chr7 15955964 15958844 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01671 289 406 PHD Transcription Factor Family AT5G58610 32.117 3.72e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01671 - - mtr:MTR_2g033390 560.451