Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01660 ATGGTTTTGGAAACGGAAATCATTTATCAACAAAGCGTGTTAGATGTTAAGTATCATCTATGCGTTTCTCAAGAGAATGGTGTCAAGGTTGATGTTTCACCTGCTTCTAATGTTGTTCCGATTTTTAGCCAAGTTAGGGTTTCGTCTGAATCGATTTCAACCGAAAAGTCACTTTTTGAATCGACTGTGAGTTGCGCGGAGATGGTTACAGATTCGATTTTAGAGGATGCTGTTGCAAGGTTTAAACCGAATGTTCGTTCTGGTAGCTGTGCTGATATTGGACCGAGGGGATCGATGGATGATGAACACATTCAAATAGATGATCTAGCTGCCCACCTTGGATTTGTGTTTAAATACCCTACACCGAGTGCTTTTTATGCAGTTTTTGATGGGCATGGAGGGCCTGATGCAGCTGTGTTTGTTAAGAACAATGCTATGAAGTTGTTTTTTGAAGATACTACTATGCTGCAAACGTATGATACTGATGCACTTCTGCTGAAGAAATTGGAAGATTCTCATCGGAAAGCTTTTCTAGGTGCCGACCTTGCTTTAGCTGATGAGCAGACTATTAGTAGTTCGTGCGGGACAACAGCACTGACTGCTCTTATACTTGGAAGGCATTTGCTGGTTGCTAATGCTGGCGATTGTCGAGCAGTTCTTTGTAAGCGTGGGGTAGCTGTTGACATGTCTCAAGACCACAGACCAAGTTATTTACCAGAGCGCAAGAGAGTGGAAGAGTTGGGCGGTTACATTGATGATGGGTATCTCAATGGTTATCTTTCTGTCACTCGTGCACTTGGGGATTGGGACTTAAAATTGCCGCTTGGTTCTGCATCACCTCTTACTGCCGAACCAGATGTTCAGGTGGTCACATTGACTGAGGAAGACGAGTTCTTGATCATTGGCTGTGATGGCATTTGGGATGTAATGTCAAGCCAGGAGGCAGTTAGTCTTGTTCGTCGTGGTTTACGAAGGCACGATGACCCACAGCAATGTGCAAGAGAGCTAGTAAAAGAAGCATTGCGCCTCCACACAACAGACAATCTTACtgttattgttatttgtttGTCTCCTGTCGAAACCATTGTTGAATCATGTTCACCCCAGAGACGAAGATTCAGAGCCTGCTCACTGTCCGAGGAGGCTCGGAACAAATTGAGGAGCTTGCTTGAAAGTAACTGA 1182 0.4382 MVLETEIIYQQSVLDVKYHLCVSQENGVKVDVSPASNVVPIFSQVRVSSESISTEKSLFESTVSCAEMVTDSILEDAVARFKPNVRSGSCADIGPRGSMDDEHIQIDDLAAHLGFVFKYPTPSAFYAVFDGHGGPDAAVFVKNNAMKLFFEDTTMLQTYDTDALLLKKLEDSHRKAFLGADLALADEQTISSSCGTTALTALILGRHLLVANAGDCRAVLCKRGVAVDMSQDHRPSYLPERKRVEELGGYIDDGYLNGYLSVTRALGDWDLKLPLGSASPLTAEPDVQVVTLTEEDEFLIIGCDGIWDVMSSQEAVSLVRRGLRRHDDPQQCARELVKEALRLHTTDNLTVIVICLSPVETIVESCSPQRRRFRACSLSEEARNKLRSLLESN 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01660 393 SUPERFAMILY PP2C-like 80 358 IPR036457 -
Tsu07g01660 393 Pfam Protein phosphatase 2C 95 348 IPR001932 -
Tsu07g01660 393 Gene3D - 71 360 IPR036457 -
Tsu07g01660 393 ProSitePatterns PPM-type phosphatase domain signature. 125 133 IPR000222 GO:0043169
Tsu07g01660 393 SMART PP2C_SIG_2 101 356 IPR001932 -
Tsu07g01660 393 SMART PP2C_4 76 354 IPR001932 -
Tsu07g01660 393 ProSiteProfiles PPM-type phosphatase domain profile. 86 356 IPR001932 -
Tsu07g01660 393 PANTHER PROTEIN PHOSPHATASE 2C 1 380 IPR015655 GO:0004722|GO:0006470
Tsu07g01660 393 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 1 380 - -
Tsu07g01660 393 CDD PP2Cc 85 356 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01660 Tsu-Chr7 15719085 15721597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01660 1 390 PP2C-type Phosphatase Gene Family AT1G48040 56.784 7.55e-147 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01660 K14803 - gmx:100798957 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01660 07 15719085 15721597 Tsu07g01660 07 15719085 15721597 ECH