Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01655 ATGGCTTCTGAGAAGAAATTGGCAAACCCATTGAGGGAGATTAAGGTTCAACAGCTCGTCTCAACATCTCTGTCGGCGAGAGTGGACATCGCCTCACCAGGCGAAGGAGGATTCAGATTTGTTCCAGGTGTTGGAATTCAACACTGTGTCACAAAGGATGGTGCTATGAAGTGGTTCCATGTGAAATATGAAGGACCGATCCTTAACAAATCCCAACCAATTGTTTAG 228 0.4561 MASEKKLANPLREIKVQQLVSTSLSARVDIASPGEGGFRFVPGVGIQHCVTKDGAMKWFHVKYEGPILNKSQPIV 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01655 75 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 43 74 IPR002132 GO:0003735|GO:0005840|GO:0006412
Tsu07g01655 75 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 1 21 IPR002132 GO:0003735|GO:0005840|GO:0006412
Tsu07g01655 75 PANTHER 60S RIBOSOMAL PROTEIN L11-1 1 21 - -
Tsu07g01655 75 PANTHER 60S RIBOSOMAL PROTEIN L11-1 43 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01655 Tsu-Chr7 15685209 15685767 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01655 44 75 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 81.250 2.87e-12 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01655 K02868 - fve:101302044 56.225