Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01637 ATGAATGAGATTACAATAACTAATTACAAAGAAAGGATGTCAgctgaagaaataaaaaagttaattaaagaAGCTGAAAATTACCATATTGAAGACAAGAAATTCCTACAGAAGGCCGAAGCAGTGAATGCATTGGATGAATACATTTACAAAATGAAAAATGCTTTAAAGAAGGAGGATGTTAATATAAAGCTCTCCTCAGAGGAAATTGAGAAGATTGAGTCTGCTATAGTTGTGGCCACAAAGTTGCTTAGTGAGAATATCCAGCAGGTTGAAGCAGATGTTCTGGAGGATCGTCTAAAGGGGCTTAAAAATAGAATAGAAGACATTATAGCTAAGactatttag 348 0.3161 MNEITITNYKERMSAEEIKKLIKEAENYHIEDKKFLQKAEAVNALDEYIYKMKNALKKEDVNIKLSSEEIEKIESAIVVATKLLSENIQQVEADVLEDRLKGLKNRIEDIIAKTI 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01637 115 Gene3D - 43 115 IPR029048 -
Tsu07g01637 115 Coils Coil 93 113 - -
Tsu07g01637 115 Pfam Hsp70 protein 2 113 IPR013126 GO:0005524|GO:0140662
Tsu07g01637 115 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 40 114 IPR029048 -
Tsu07g01637 115 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 113 - -
Tsu07g01637 115 PANTHER HEAT SHOCK PROTEIN 70KDA 1 113 IPR013126 GO:0005524|GO:0140662
Tsu07g01637 115 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 42 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01637 Tsu-Chr7 15338002 15338349 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01637 2 113 Calmodulin-binding Proteins AT3G12580 45.536 2.64e-20 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01637 K03283 - mtr:MTR_1g116250 145.976