Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01635 ATGGCAAGAAAATTCGAAGGAAAAGCTGTTGGAATAGACCTTGGCACCACCTACTCGTGTGTTGCAGTGTGGCAGGAGCAACATTCTCGAGTTGAAATCATTCACAACGATCAAGGAAACAGAACAACTCCTTCTTTTGTTGCTTTTACTGAAGAACAAAGGTTGGTTGGTGATGCTGCTAAGAATCAAGCTGCTGCTAACCCTCAAAACACTATCTTTGATGCAAAGAGGTTAATTGGTAGGAAGTTTAGTGATCAAGTTGTTCAAGATGATATAATGTTGTGGCCATTTAAGGTCACTGCTGGTGTCAATGACAAACCCATGATTACTGTCACGTACAAGGGCCGTGAGAAGAAGCTGTGTGCAGAAGAAGTGTCATCTATGGTACTCACCAAGATGCGAGAAATTGCGGAGGCGTACGTAGAATCACCTGTTAAAAATGCAGTAGTTACTGTCCCTGCTTATTTTAGAGATTCTCAACGAAAAGCCACAGTCGATGCTGGTGCTATTGCTGGCCTCAATGTTATAAGGGTAATGAATGAACCTACTGCTGCAGCTATTGCATATGGCCTTGATAAGAGAGCTGACTGTGTTGgagaaagaaatatttttgtatttgatctTGGTGGTGGCACTTTTGATGTGTCTCTCCTAACTATTAAGGATAATGTCTTCCGAGTTAAGGCAACTGCTGGAAACACTCACCTTGGTGGAGAGGACTTTGACAATAGAATAGTGAACTATTGTGTTCAAGAGTTTAAGAGAAAGAATAAAGTGGACATTGGTGGGAATCCAAGGGCCTTAAGGAGGTTGAGAACAGCTTGTGAAAGAGCTAAAAGATCACTTTCTTTCCTTGTTGTCTCAACTATTGAAATTGATTCTTTATTTGAAGGAATTGATTTTTCTTCATTAATCAATCGTGCCAAGTTTGAAGAAGTGAATATGGATCTTTTCGAGGAGTGCATGAAGATTGTTGAGAGTTGTCTTACAGATGCTAACTTGGAAAAGAGTAAGGTTGACGATATTGTCCTTGTTGGTGGATGTTCTAGGATTCCTAAAGTGCAGCAGCTGTTACAGGAATTTTTCAATGGAAAGGAGTTGTGCAAGA 1108 0.3989 MARKFEGKAVGIDLGTTYSCVAVWQEQHSRVEIIHNDQGNRTTPSFVAFTEEQRLVGDAAKNQAAANPQNTIFDAKRLIGRKFSDQVVQDDIMLWPFKVTAGVNDKPMITVTYKGREKKLCAEEVSSMVLTKMREIAEAYVESPVKNAVVTVPAYFRDSQRKATVDAGAIAGLNVIRVMNEPTAAAIAYGLDKRADCVGERNIFVFDLGGGTFDVSLLTIKDNVFRVKATAGNTHLGGEDFDNRIVNYCVQEFKRKNKVDIGGNPRALRRLRTACERAKRSLSFLVVSTIEIDSLFEGIDFSSLINRAKFEEVNMDLFEECMKIVESCLTDANLEKSKVDDIVLVGGCSRIPKVQQLLQEFFNGKELCK 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01635 369 PRINTS 70kDa heat shock protein signature 38 50 - -
Tsu07g01635 369 PRINTS 70kDa heat shock protein signature 8 21 - -
Tsu07g01635 369 PRINTS 70kDa heat shock protein signature 60 68 - -
Tsu07g01635 369 PRINTS 70kDa heat shock protein signature 148 168 - -
Tsu07g01635 369 PRINTS 70kDa heat shock protein signature 339 355 - -
Tsu07g01635 369 PRINTS 70kDa heat shock protein signature 211 221 - -
Tsu07g01635 369 Gene3D - 73 128 - -
Tsu07g01635 369 Pfam Hsp70 protein 9 369 IPR013126 GO:0005524|GO:0140662
Tsu07g01635 369 Gene3D - 10 369 - -
Tsu07g01635 369 Gene3D - 194 368 - -
Tsu07g01635 369 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Tsu07g01635 369 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Tsu07g01635 369 SUPERFAMILY Actin-like ATPase domain 200 367 IPR043129 -
Tsu07g01635 369 Gene3D Actin; Chain A, domain 4 237 320 - -
Tsu07g01635 369 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 369 - -
Tsu07g01635 369 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Tsu07g01635 369 PANTHER HEAT SHOCK PROTEIN 70KDA 4 369 IPR013126 GO:0005524|GO:0140662
Tsu07g01635 369 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01635 Tsu-Chr7 15225536 15299454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01635 1 369 Calmodulin-binding Proteins AT3G12580 73.984 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01635 K03283 - gmx:102667572 604.364