Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01629 ATGGATCAATATGAGAAAGTTGAGAAGATTGGTGAAGGTACATACGGTGTCGTTTACAAGGCTCGTGACCGTGTTACTAATGAAACTATCGCGCTTAAGAAGATTCGtcttgaacaagaagatgaaggTGTTCCTAGCACCGCTATTCGTGAGATTTCTCTTCTTAAAGAAATGCAGCATAGGAACATCGTTAGGTTGCAGGATGTAGTGCACAGTGACAAGCGATTGTATCTGGTTTTTGAGTATCTGGACTTGGATCTGAAGAAGCATATGGATTCGTCTCCTGAGTTTGTAAAAGATCCGCGACAAGTAAAAATGTTCCTTTATCAAATGCTCTGTGGAATTGCTTACTGTCATTCACATAGAGTTCTTCATCGAGACTTGAAACCACAGAATTTGTTGATAGATCGTCGTACTAATTCACTAAAGCTTGCAGATTTTGGATTGGCTAGGGCATTTGGCATTCCCGTCAGGACATTCACACACGAGGTAGTTACATTGTGGTACCGAGCTCCAGAAATATTGCTTGGATCTCGTCATTATTCGACCCCAGTTGATGTTTGGTCAGTGGGATGTATATTTGCAGAGATGGCAAACCGACGACCTCTGTTCCCTGGGGACTCCGAGAttgatgaattatttaaaatattcagGTGA 657 0.3988 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSDKRLYLVFEYLDLDLKKHMDSSPEFVKDPRQVKMFLYQMLCGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMANRRPLFPGDSEIDELFKIFR 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01629 218 Pfam Protein kinase domain 4 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01629 218 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Tsu07g01629 218 Gene3D Phosphorylase Kinase; domain 1 1 84 - -
Tsu07g01629 218 Gene3D Transferase(Phosphotransferase) domain 1 86 218 - -
Tsu07g01629 218 ProSiteProfiles Protein kinase domain profile. 4 218 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01629 218 PANTHER CELL DIVISION PROTEIN KINASE 3 218 - -
Tsu07g01629 218 PANTHER - 3 218 - -
Tsu07g01629 218 SUPERFAMILY Protein kinase-like (PK-like) 1 218 IPR011009 -
Tsu07g01629 218 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Tsu07g01629 218 SMART serkin_6 4 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01629 Tsu-Chr7 15122887 15126787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01629 1 218 Core Cell Cycle Gene Families AT3G48750 89.908 3.83e-148 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Tsu07g01629 Pkinase 4.3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01629 K02206 - gmx:100780359 436.802