Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01627 ATGTGTAGTAGCATCTTTGTCTCATCATCCTcaagaaaatcatcaaaaaatatGGACAATTATCAAGGTGATTTAACTGACATAATCAGAGTTCACGGTACTACTACTGCTACTGCTACTACTTCTGCCGGAGCATATAGTACAACAGgaacttcatcatcatcatctgaaCATGTTTTACAACATCTTCATGATAATCAGTGGcaacatcataatcataatcataataatcaattcttctcttctgatcatcatcatcatcagcaTCAGCAACAGCATCAACAACCTATGAGTTTTGCTAATTCAATTCTTGAAGGAACAAACATGAATAATACCATGTTTGGTGATCCATTATTCTCATCTTTAAGAGATCCATTTCTACAAGAACTTGATCATATACCTTCATCTTCTTACTTCAACATCACAACAAATACTACTGCTACTGCTGCTACTACTACTGCTTCTGCTTCGCCGGTTTCGACTTCTATAATTGATGTGTCTAATGTTAGTACTTCTATTTTTGCACTTGATCATAATAATCACGAGATTAGATCAAATTCAAGACCATGTAAGAATATATTTTCAAACATGATTCAGATCTCTCCTAATCCAAAGTTACCAATTAATTATGAATCTTCTTCAACTATGGCACCTTCTCCAAGACCAATTAAACAAGTTGTTTCAaacaatatcaatattaatGCAAATATCTCAAAGGATTCTCTTCTAGATAACACAGGAGTTCAGATCTCATCTTCAAGAAATTCATCTGGTATTAAAAGAAGGAAGAATCAGGCAAAAAAGGTGGTATGTATTCCTGCACCAGCAGCTGCAAATAGTAGACAAACTGGAGAAGTAGTTCCTTCAGATTTGTGGGCTTGGAGAAAATATGGTCAGAAACCCATTAAAGGTTCACCTTATCCAAGGGGTTACTATAGATGCAGCAGTTCAAAGGGATGTTCAGCAAGGAAACAAGTTGAGAGAAGCAGAACAGATCCAAACATGTTAGTTATCACTTACACTTCAGAACACAATCATCCATGGCCAACACAAAGAAATGCTTTAGCAGGTTCAACAAGATCTCAACCGtccaaaaacatgaaaaattcAGAAACTTCTTTGACTCAAAATGACACAACAAAACCAAAAGAAGAACATCAAGAGAACAATAATAACAGTGATGGAAATGATTCTCCAATTGTTAACAATGTGAAGGAAGAAAATATGGAAGATATAGAGAAGTTACAAATTGAAATGGATGAAGTTGAAGGTGAATTTAGTGATGGACTTTCTTATAAACCTTCTATGATTGAAAATAATCAAAGTCATGAAGATTTTTTTGCTGAGTTAGGTGAAATTGAAGCTGATCCATTAAACCTATTGTTTAATCAAGGTTTTAGTGGTAATTCAAGTACTAATGATGTTCATCAAAGAGATCAATCCAAGGGTTTAGATCCATTTCATCTCTTTGACTGGTCAGTTGACAACAACAATACCAACAAATAA 1506 0.3181 MCSSIFVSSSSRKSSKNMDNYQGDLTDIIRVHGTTTATATTSAGAYSTTGTSSSSSEHVLQHLHDNQWQHHNHNHNNQFFSSDHHHHQHQQQHQQPMSFANSILEGTNMNNTMFGDPLFSSLRDPFLQELDHIPSSSYFNITTNTTATAATTTASASPVSTSIIDVSNVSTSIFALDHNNHEIRSNSRPCKNIFSNMIQISPNPKLPINYESSSTMAPSPRPIKQVVSNNININANISKDSLLDNTGVQISSSRNSSGIKRRKNQAKKVVCIPAPAAANSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNMKNSETSLTQNDTTKPKEEHQENNNNSDGNDSPIVNNVKEENMEDIEKLQIEMDEVEGEFSDGLSYKPSMIENNQSHEDFFAELGEIEADPLNLLFNQGFSGNSSTNDVHQRDQSKGLDPFHLFDWSVDNNNTNK 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01627 501 MobiDBLite consensus disorder prediction 305 402 - -
Tsu07g01627 501 Gene3D WRKY domain 262 342 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu07g01627 501 MobiDBLite consensus disorder prediction 332 377 - -
Tsu07g01627 501 MobiDBLite consensus disorder prediction 1 20 - -
Tsu07g01627 501 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 22 494 IPR044810 GO:0003700
Tsu07g01627 501 SMART WRKY_cls 288 348 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g01627 501 SUPERFAMILY WRKY DNA-binding domain 286 349 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu07g01627 501 Coils Coil 405 425 - -
Tsu07g01627 501 ProSiteProfiles WRKY domain profile. 283 349 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g01627 501 MobiDBLite consensus disorder prediction 69 90 - -
Tsu07g01627 501 MobiDBLite consensus disorder prediction 69 95 - -
Tsu07g01627 501 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 22 494 - -
Tsu07g01627 501 Pfam WRKY DNA -binding domain 290 347 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g01627 501 MobiDBLite consensus disorder prediction 469 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01627 Tsu-Chr7 15078245 15081738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01627 114 473 WRKY Transcription Factor Family AT2G34830 47.013 2.60e-83 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu07g01627 WRKY 2.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01627 - - gmx:100805707 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01627 07 15078245 15081738 Tsu07g01627 07 15078245 15081738 ECH