Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01576 ATGCATTACTTGTTTTTGTACGCGGGTAAGGCAGTGCTGTGTTACTGTGTATTTGCAACGGGGCTTTGGTGTCTTGACCCGAACCGTGAATCATCGAAGAAGGCTCATGAGCAGAAGAAAGAGATTGCAAAGCGTCAAGGTCGTCCCATCATTCAAACCAATTCTTACGAGGATGTGATAGCCCGTGATGTTATAAATCCTGATCACATTAATGTGGAATTTGACTCCATTGGGGGATTGGAAACTATTAAACAAGCTTTGTATGAGCTTGTTATTCTACCCCTAAAGCAGCCCGACTTGTTCTCGCATGGTAAACTCCTTGGACCACAAAAGGGGGTCTTGTTGTATGGACCTCCTGGCACTGGGAAAACTATGGTTGCAAAAGCTATTGCCAAGGAGTCCGGAGCGGTATTCATCAATGTGAAGATATCTAACCTAATGAGCAAATGGTTTGGGGATGCCCAAAAGCTTGTGTCTGCCGTATTTAGCTTGGCCGATAAGCTTCAGCCTGCCATCATATTCATTGATGAAGTAGACAGTTTTTTGGGTCAACGTTGTACATCAGATCACGAGGCTATGTTAAACATGAAAACTGAGTTCATGGCTTTATGGGGCAGATTCACCACCAACAAAAATGCTCAGGTTATGGTGCTTGCAGCAACTAATCGTCCGTCAGAACTTGATGAAGCAATACTCAGGCGGTTTCCTCAAGCTTTTGAAATTGGATATCCAGACAAAAGAGAGAGGGCTGAGATATTGAAGGTTATCTTGAAGGACGAAAGGGTTAAAGGTGACATAGACTTCAGTTATATAGCTGGATTATGTAAGGGTTACACCGGTTCAGATCTATTTGATCTTTGCAAGAAGGCTGCGTATTTCCCTATCAGAGAACTATTGGACGATGAGAAGAAAGGGAAACAATCTTGTGAACCTAGACCTTTGTCACAGTTAGATTTGAAGATGGCCCTTTCAACTTCACGGAAGACAACTGTTGCTGCAAATGAATACAGTAGAATGAACCCCTGGATCCGTAAAATTTTGAGTTTCTTTAGACAATTCTTCTGCCGTCATTAG 1074 0.4274 MHYLFLYAGKAVLCYCVFATGLWCLDPNRESSKKAHEQKKEIAKRQGRPIIQTNSYEDVIARDVINPDHINVEFDSIGGLETIKQALYELVILPLKQPDLFSHGKLLGPQKGVLLYGPPGTGKTMVAKAIAKESGAVFINVKISNLMSKWFGDAQKLVSAVFSLADKLQPAIIFIDEVDSFLGQRCTSDHEAMLNMKTEFMALWGRFTTNKNAQVMVLAATNRPSELDEAILRRFPQAFEIGYPDKRERAEILKVILKDERVKGDIDFSYIAGLCKGYTGSDLFDLCKKAAYFPIRELLDDEKKGKQSCEPRPLSQLDLKMALSTSRKTTVAANEYSRMNPWIRKILSFFRQFFCRH 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01576 357 ProSitePatterns AAA-protein family signature. 215 234 IPR003960 GO:0005524|GO:0016887
Tsu07g01576 357 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 300 IPR027417 -
Tsu07g01576 357 Gene3D - 71 330 IPR027417 -
Tsu07g01576 357 Gene3D - 244 324 - -
Tsu07g01576 357 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 3 330 - -
Tsu07g01576 357 Pfam AAA+ lid domain 265 300 IPR041569 -
Tsu07g01576 357 Pfam ATPase family associated with various cellular activities (AAA) 113 242 IPR003959 GO:0005524|GO:0016887
Tsu07g01576 357 CDD AAA 78 243 - -
Tsu07g01576 357 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-LIKE 3 330 - -
Tsu07g01576 357 SMART AAA_5 109 245 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01576 Tsu-Chr7 14496478 14500044 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01576 72 303 Calmodulin-binding Proteins AT3G56690 35.593 8.77e-39 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01576 K22530 - gmx:100796908 543.502