Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01574 ATGTTTTTGTTTCCGCAACACAACCTTAATCTCTTCTCAAACCACTGTGAAGAAATTCAAGCATCCTTGTCCTTTGTCACAAAGATTCATTTCAACTCTCTAGTCTCTACCGTCAAAACAATAACTGAACAAGTTATACTGGAAGAATCTGTGAATCCAATGGGAACTACAAGTAACCAAGAAGAAAGAGAGATTGAAGAGGGTTCAGTGGCTATGGATGAGGAGTTGAATAGAATAACACCATGGAGGAAACAGATAACAGTTAGAGGATTAATAGctagtttttttattggaaTAATTTACAGTGTGATTGTTATGAAACTCAATCTTACAACTGGATTAGTTCCTAATCTCAATGTTTCTGCTGCTCTACTTGGTTTTGTGTTTATTCGAATTTGGACTAAGATTCTTGCAAAAGCTAAGATTGTTTCAACTCCATTCACTAGACAGGAGAATACCGTCATTCAGACTTGTGCCGTTGCTTGCTATAGCATCGCTGTAGGAGGTGGTTTTGGGTCTTATCTATTGGGGTTGAATAGGAGGACTTATGAGCAAGCTGGGGTTGATACACCAGGGAATACTCCTGGTAGTACTAAGGAGCCTGCAATTGGCTGGATGACAGCTTTTCTCTTTGTCACCAGTTTTGTTGGACTTTTAGCTTTGGTCCCCATTCGAAAGATTATGATAATAGACTACAAATTAACTTATCCAAGTGGAACTGCTACTGCTGTTCTTATTAATGGATTTCATACTCCTAAAGGAGATGTGATGGCCAAGAAGCAGGTTCAtggatttgtgaaatttttcGCTGCGAGCTTTATCTGGGCCTTCTTTCAGTGGTTTTTTACCGGTGGAGATAATTGTGGATTTGTTCAGTTTCCTACTTTTGGATTGCAAGCATGGAGAAACTCATTTTACTTCGATTTCAGCATGACTTATGTTGGAGCAGGAATGATTTGTTCTCATCTTGTTAATTTATCGTTACTTCTCGGGGCTGTTGTTTCATGGGGCATCATGTGGCCGTTAATCAAGGGACTAAAAGGAGAATGGTTCCCTGCAAGTATACCTGAAAGTAGCATGAAGAGTCTCAACGGTTATAAGGTTTTTATTTCCATTGCTTTGATTCTTGGTGATGGATTTTACAATTTTCTCAAAGTTCTCTATTTCACTGCCACGAATATTCATGCCAACATGAAAAAGAAGAATCTTAATAATACATTTACCGATAACCAGAATCAATTGCCTCTTGATGATCTCAAACGAAACGAAATGtttgcaagagaaaatattccTATTTGGTTGGCTTGTACAGGGTACATATTTTTCTCTGTCATCTCTATCGTCGTAATCCCGTTGATGTTCCCTCAATTGAAGTGGTATTTTGTTCTGTTTGCGTATATTTTCGCACCCTCACTCGGTTTCTGCAATGCTTATGGTGCTGGATTAACCGATATGAACATGGCCTATAACTACGGGAAAGTGGCTCTCTTTGTGCTTGCAGCCTTGGCAGGAAAAAGTGACGGTGTAGTTGCTGGACTTGTAGGGTGTGGTTTGATTAAATctattgtttcaatttcatCTGATTTGATGCATGATTTGAAAACCGGTCATCTCACCTTGACTTCACCTCGTTCGATGCTTGTAAGCCAAGCAATCGGTACAGCAATAGGTTGTGTTGTTGCTCCTATCACATTCTTCCTTTTTTACAAGGCATTTGATGTTGGTAATCCAGATGGTGTCTACAAGGCTCCATATGCTATCATATATCGAAACATGGCAATTTTGGGCGTGGAAGGTTTTTCTGCACTTCCAGATCATTGCTTGCAACTATGTTGCGGATTTTTTGTATTTGCGATAGTGGCTAATTTGGTGAGAGATCTTGGCCCAAAAAAAGTTGGCAAATGGATTCCACTTCCAATGGCTATGGCTGTGCCGTTTCTAGTTGGTGGTTACTTTGCCATTGATATGTGTATGGGAAGTTTGATTGTGTATGCATGGCATGTGCTAAACAAAAACGAAGCTGGTTTGATGGTTCCTGCAGTTGCTTCTGGTTTGATTTGTGGAGATGGATTATGGATTCTTCCTTCATCCATTCTTGCTTTGTTAAAGGTTAGAACAGATGCGTGTATGAAGGATATCGGTGGAAATTTAGTAGAGATGAGTGGAAAGTGGAAGCGGGTTGGATCAAACTGTGGAATCTCCCTATTTCTTCGAAGTATGCAATCTTATATCGAGTACAATTGGCACTTGTTTCTATGCTGTGAGGACGGTGTTAATTGTTGGAAGAAACAGCGCTTATGGCCTCATCATGAGAAGCTCGTGGAGAAAGCAGAAGGATTTAGCGAAGTATTAATTCGCATATGGCAACAGCTGAACCAATCACAAATGGTTAATTTTGCCATGACATATTGGAGTACATGGAAAAAGAGGAACCTAAAATTGTGGGAAGATAAAGATGAGACTGTCGAACAGATCCGGAACAGTAACAAGCAGTCACACAATGGCAGCCTCATCCTAGTGGATTTATCAAATGCAACATTGATGTCGCGACGTTCACAACTGAGGAATACTTACGCAAGATACAACAGGTCAATTTTTGGGAGCAATGCCAGATGTTTATCACCACGCCAGCGGCTAATCTACCAACAATCGGAAAGTGtgaaagaaaaaaaaatggcttCAGATCCAAAGCTTCATACTTTTGATGAGGTGTCAAAGCACAACAAGACCAAAGATTGCTGGCTTATTCTTTCtggaaagGTGTATGATGTCACCCCTTTTATGGAGGATCATCCTGGAGGTGACGAGGTTCTGTTGTCTGCAACAGGGAAGGATGCAACCAATGATTTTGAAGATGTAGGACACAGTGATTCTGCTAGAGAAATGATGGACAAATACTACATTGGTGAGATTGATCCATCAACTGTGCCACTAAAGCGCTCCTACGTTCCACCTCAGCAATCTCAGTACAACCCCGACAAGACTTCGGAATTTGTGATCAAGATTTTGCAGTTCTTGGTGCCACTCCTGATATTGGGATTGGCCTTTGTTGTCCGGAACTACACCAAGAAAGAAGAGTAG 3081 0.3957 MFLFPQHNLNLFSNHCEEIQASLSFVTKIHFNSLVSTVKTITEQVILEESVNPMGTTSNQEEREIEEGSVAMDEELNRITPWRKQITVRGLIASFFIGIIYSVIVMKLNLTTGLVPNLNVSAALLGFVFIRIWTKILAKAKIVSTPFTRQENTVIQTCAVACYSIAVGGGFGSYLLGLNRRTYEQAGVDTPGNTPGSTKEPAIGWMTAFLFVTSFVGLLALVPIRKIMIIDYKLTYPSGTATAVLINGFHTPKGDVMAKKQVHGFVKFFAASFIWAFFQWFFTGGDNCGFVQFPTFGLQAWRNSFYFDFSMTYVGAGMICSHLVNLSLLLGAVVSWGIMWPLIKGLKGEWFPASIPESSMKSLNGYKVFISIALILGDGFYNFLKVLYFTATNIHANMKKKNLNNTFTDNQNQLPLDDLKRNEMFARENIPIWLACTGYIFFSVISIVVIPLMFPQLKWYFVLFAYIFAPSLGFCNAYGAGLTDMNMAYNYGKVALFVLAALAGKSDGVVAGLVGCGLIKSIVSISSDLMHDLKTGHLTLTSPRSMLVSQAIGTAIGCVVAPITFFLFYKAFDVGNPDGVYKAPYAIIYRNMAILGVEGFSALPDHCLQLCCGFFVFAIVANLVRDLGPKKVGKWIPLPMAMAVPFLVGGYFAIDMCMGSLIVYAWHVLNKNEAGLMVPAVASGLICGDGLWILPSSILALLKVRTDACMKDIGGNLVEMSGKWKRVGSNCGISLFLRSMQSYIEYNWHLFLCCEDGVNCWKKQRLWPHHEKLVEKAEGFSEVLIRIWQQLNQSQMVNFAMTYWSTWKKRNLKLWEDKDETVEQIRNSNKQSHNGSLILVDLSNATLMSRRSQLRNTYARYNRSIFGSNARCLSPRQRLIYQQSESVKEKKMASDPKLHTFDEVSKHNKTKDCWLILSGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKRSYVPPQQSQYNPDKTSEFVIKILQFLVPLLILGLAFVVRNYTKKEE 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01574 1026 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 894 983 IPR036400 -
Tsu07g01574 1026 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 927 934 IPR018506 GO:0020037
Tsu07g01574 1026 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 80 696 IPR004813 GO:0035673
Tsu07g01574 1026 Gene3D - 888 977 IPR036400 -
Tsu07g01574 1026 PANTHER METAL-NICOTIANAMINE TRANSPORTER YSL3 59 711 - -
Tsu07g01574 1026 Pfam Cytochrome b5-like Heme/Steroid binding domain 901 971 IPR001199 -
Tsu07g01574 1026 SMART Cyt_b5_2 899 972 IPR001199 -
Tsu07g01574 1026 Pfam OPT oligopeptide transporter protein 85 699 IPR004813 GO:0035673
Tsu07g01574 1026 PRINTS Cytochrome B5 signature 921 931 IPR001199 -
Tsu07g01574 1026 PRINTS Cytochrome B5 signature 946 953 IPR001199 -
Tsu07g01574 1026 PRINTS Cytochrome B5 signature 959 971 IPR001199 -
Tsu07g01574 1026 PRINTS Cytochrome B5 signature 931 945 IPR001199 -
Tsu07g01574 1026 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 896 972 IPR001199 -
Tsu07g01574 1026 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 59 711 IPR045035 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01574 Tsu-Chr7 14437185 14449479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01574 892 1025 NADPH P450 reductases AT5G53560 79.851 4.59e-72 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01574 - - gmx:100820417 1185.24