Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01559 ATGGGTCATTGCTGCAGCAAAATTGCTGTCGAAAACGAAACAATCGCCACCGATCACAACCATAAACCACCTAATCACGCACCATCACCGCTTTCTCAACCTATTTCAAGCATCAGCGATGCTACTCCAGGAAGACAAACTCCGGCGACGTCTTTCTCAACAAGTCCTTTCAATAGTCCTCTTCCGGCAGGTGTTATGCCTTCTCCGGCTACCAAGACTCCTGGAAGGAAATTTAGGTGGCCACTTCCTCCTCCGTCTCCGGCTAAGCCGATTATGGCGGCTTTGATGAGACGGCAAGGGAAGACGAAACCGAAAGATGGACCTATACCGGAGGAACAAGGTGGGGAAGGTGGTGGAGATGGAGAGAGAACGTTGGATAAGAGTTTTGGTTATGGGAAGAATTTTGGGGCGAAATTTGAGATTGGGAAAGAAGTTGGTCGAGGGCATTTTGGTCATACTTGTTGGGCTAAAGGGAAGAAAGGTGAACTTAAGGGAGTTTCAGTTGCTGTGAAAATCATAACCAAAGCTAAGATGACTTCGGCAATAGCAATTGAAGATGTGAGGAGGGAGGTGAAAATGTTGAAGGCCTTATCTGGACATAGGAATTTGGTCAAGTTTTATGATGCATTTGAGGATGCGAACAACGTCTACATTGTGATGGAGTTGTGTGAGGGCGGAGAATTACTGGACAGAATTCTAGATAGaGGTGGGAGATACACAGAGGATGATGCCAAAGTTATTCTTCTACAAATTCTGAATGTAGTTGCCTTTTGTCATCTTCAGGGAGTTGTTCATCGTGATCTAAAACCAGAGaattttctttttgtctcAAAAGATGAGGATGCTGTTTTGAAAGTTATTGACTTTGGTTTATCTGATTTTGTTAGGCCAGATCAACGCCTCAATGATATTGTTGGTAGTGCCTACTATGTTGCACCTGAAGTGCTCCATAGATCTTATAGTGTTGAAGGAGACTTATGGAGTATTGGAGTTATAACTTACATATTATTATGTGGAAGTAGACCGTTTTGGGCACGGTCTGAATCAGGAATCTTCCGGTCTGTGTTAAGAGCAAATCCTAACTTTGATGATTCACCTTGGCCATCAATATCACCAGAAGCTAAAGACTTCGTGAAAAGACTTTTGAACAAAGACCACAGAAAAAGAATGACCGCTGCCCAAGCTTTATCTCACCCGTGGTTGAGAGATGAAAAAAATGCCATTCCTTTAGATATTTTGATTTACAAGTTAGTCAAGTCATATGTGCGTGCCTCACCTTTGAAGCGTGCGGCGTTGAAGGCTCTCTCAAAAGCATTGCCAGATGATGAGCTTACCTACCTTAGAGCACAATTTAGCCTCTTGGAACCTAGAGATGGTTTTATTTCGTTAGAGAATTTCAGAGTTGCTCTCATGAAAAACGCAACTGATGCCATGAAGGAAGCAAGGGTCCCTGACATTCTAAATTTGATGGATCCGCTCTCCTATAAAAGAATGGACTTCGAAGAGTTTTGCGCTGCTGCAATCAGTGTATACCAGCTGGAAGTTCATCCAGATTGGGATAAAATTGCCATCGCagcttttgattattttgacGAGGAAGGGAACCGTGTCATTTCACTCGAGGAGTTGGCACAGGAGATGAATTTGGGTCCTTCTGCGTACTCTTTAATGGGTGATTGGATCAGAAAATCTGATGGAAAACTCAGCTTGGTCGGATATACGAAGTATTTGCATGGTGTCACAATTCGTAGTTCAAATACAAGACACAGATAG 1773 0.4253 MGHCCSKIAVENETIATDHNHKPPNHAPSPLSQPISSISDATPGRQTPATSFSTSPFNSPLPAGVMPSPATKTPGRKFRWPLPPPSPAKPIMAALMRRQGKTKPKDGPIPEEQGGEGGGDGERTLDKSFGYGKNFGAKFEIGKEVGRGHFGHTCWAKGKKGELKGVSVAVKIITKAKMTSAIAIEDVRREVKMLKALSGHRNLVKFYDAFEDANNVYIVMELCEGGELLDRILDRGGRYTEDDAKVILLQILNVVAFCHLQGVVHRDLKPENFLFVSKDEDAVLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYSVEGDLWSIGVITYILLCGSRPFWARSESGIFRSVLRANPNFDDSPWPSISPEAKDFVKRLLNKDHRKRMTAAQALSHPWLRDEKNAIPLDILIYKLVKSYVRASPLKRAALKALSKALPDDELTYLRAQFSLLEPRDGFISLENFRVALMKNATDAMKEARVPDILNLMDPLSYKRMDFEEFCAAAISVYQLEVHPDWDKIAIAAFDYFDEEGNRVISLEELAQEMNLGPSAYSLMGDWIRKSDGKLSLVGYTKYLHGVTIRSSNTRHR 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01559 590 CDD STKc_CAMK 138 400 - -
Tsu07g01559 590 MobiDBLite consensus disorder prediction 31 61 - -
Tsu07g01559 590 ProSitePatterns Protein kinases ATP-binding region signature. 145 171 IPR017441 GO:0005524
Tsu07g01559 590 SUPERFAMILY Protein kinase-like (PK-like) 138 425 IPR011009 -
Tsu07g01559 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Tsu07g01559 590 SMART serkin_6 139 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01559 590 Gene3D Transferase(Phosphotransferase) domain 1 229 422 - -
Tsu07g01559 590 PANTHER SERINE/THREONINE-PROTEIN KINASE 45 584 - -
Tsu07g01559 590 ProSiteProfiles Protein kinase domain profile. 139 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01559 590 MobiDBLite consensus disorder prediction 98 125 - -
Tsu07g01559 590 Gene3D - 423 578 - -
Tsu07g01559 590 MobiDBLite consensus disorder prediction 16 67 - -
Tsu07g01559 590 MobiDBLite consensus disorder prediction 99 125 - -
Tsu07g01559 590 PANTHER CDPK-RELATED KINASE 3-LIKE ISOFORM X1 45 584 - -
Tsu07g01559 590 Gene3D Phosphorylase Kinase; domain 1 133 228 - -
Tsu07g01559 590 SUPERFAMILY EF-hand 434 578 IPR011992 -
Tsu07g01559 590 Pfam Protein kinase domain 139 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01559 Tsu-Chr7 14224302 14231606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01559 32 584 EF-hand Containing Proteins AT3G50530 58.466 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tsu07g01559 Pkinase 7.3e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01559 - - gmx:100803631 1023.08