Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01553 ATGTTGCAGCATCATCAGAATCATCACCACCATTCATTTTCCTTTGATCAACATGATTCTTCTGCTGTTCCTGCTGGTTATGGTCCCACAGCTTACAACATGGCTTTTGGGGTTAATTCTGATTCCTCTGCTCTAGATGCTACCACCACCATTGATAATGGCGGTGTACCTTTAACTTTGCAGCCTTTTCACAACATTTCTGCTATCACAACTCCCAAATCCTCAGGCACAGCAGTTGGAATGGCGGCTTCATTAGGAAACCCTTTCACAATTTCACAATGGAGAGAGCTTCAAAGACAAGTTATGATTTACAAGTATTTGGTGGCTTCTTTTCCTGTTCCTTCTGAACTTCTTTCATTGGATGGTAGTTTCAAACAGAAGTTATCATCAAGAAATAGAAGTAAAAATGATCCAGAGGCAGGTAGGTGCAGAAGAACTGATGGTAAAAAATGGAGATGTTCAAGAGATGTGGCTCATGATAGTGACAAGTATTGTGAAAAACATATGCATAGAGGTCGTCCCGCCCGTTCAAGAAAGCATGTGGAACTTCACACCAATGACAATattcataatcaaataaaaaaggcACATTGTGATTCTAATCCTTTTTCTGTTTCTAATGTTGGTGGATCTTCATCACATTTTCATCCTTACAGTGCTTTTTATCCTTATCACCAATCTTTCCTTTCTTTGGATAATAATAGCATTGGTATCAAAGCTCCAAGTTATGACTTTTCAAATTGGCAGCAAAGGTGCTTGGAGTGGATGATGCTAAATGGTGCTTATAACTCAAGATGGCACACTCTAATGCATTACAACAAACTTGGATTAACCAATGAAAGTTTCTATCAGAATAACACCGAGTCTCAATATCTAAATTCATTTCCTATATATACTACTTCTGAACTTCCTCCACAAGAAAAACTCTTCTCTCTCATGTATAATCCCCTTACTGTTCCCATGCAAACTCTCCAATATGATGGTTCCTCTAATGCAGAGACAGTGGAAAACAATGTCAACACCAACAACAATGTTTCTGATACATCAATTGGTAACTTATATGATTCATCTCTTGATTTATCAATGGGAGGTCCACTAGCTGAAGTTTTGAGGCCAATCAAGGTAACTTCCATCAATGATGCAACAAACTCTAATCCATCTTCACATGTTGCAACAAACCATATTGAATCTATTGGAGCTTCAGGAGGAACAGGAATGCTTTCATCTCCTTCTGCTGTTTTGCATGATAAAACTCTTGTTACTTTTTCTGATAGTAGTGGTAATAGTAGTCCAACTACTTGCATCATCAAGGGTCAATTCTGA 1323 0.3772 MLQHHQNHHHHSFSFDQHDSSAVPAGYGPTAYNMAFGVNSDSSALDATTTIDNGGVPLTLQPFHNISAITTPKSSGTAVGMAASLGNPFTISQWRELQRQVMIYKYLVASFPVPSELLSLDGSFKQKLSSRNRSKNDPEAGRCRRTDGKKWRCSRDVAHDSDKYCEKHMHRGRPARSRKHVELHTNDNIHNQIKKAHCDSNPFSVSNVGGSSSHFHPYSAFYPYHQSFLSLDNNSIGIKAPSYDFSNWQQRCLEWMMLNGAYNSRWHTLMHYNKLGLTNESFYQNNTESQYLNSFPIYTTSELPPQEKLFSLMYNPLTVPMQTLQYDGSSNAETVENNVNTNNNVSDTSIGNLYDSSLDLSMGGPLAEVLRPIKVTSINDATNSNPSSHVATNHIESIGASGGTGMLSSPSAVLHDKTLVTFSDSSGNSSPTTCIIKGQF 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01553 440 Pfam QLQ 88 118 IPR014978 GO:0005524|GO:0005634|GO:0006355
Tsu07g01553 440 ProSiteProfiles WRC domain profile. 137 183 IPR014977 -
Tsu07g01553 440 ProSiteProfiles QLQ domain profile. 88 123 IPR014978 GO:0005524|GO:0005634|GO:0006355
Tsu07g01553 440 MobiDBLite consensus disorder prediction 126 147 - -
Tsu07g01553 440 MobiDBLite consensus disorder prediction 128 147 - -
Tsu07g01553 440 Pfam WRC 138 180 IPR014977 -
Tsu07g01553 440 PANTHER - 62 435 IPR031137 GO:0005634|GO:0006351|GO:0032502
Tsu07g01553 440 PANTHER GROWTH-REGULATING FACTOR 7 62 435 - -
Tsu07g01553 440 SMART QLQ_2 87 122 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01553 Tsu-Chr7 14153345 14155613 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01553 88 182 GRF Transcription Factor Family AT5G53660 58.947 1.82e-29 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Tsu07g01553 WRC 2.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01553 - - mtr:MTR_3g092330 443.736