Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01537 ATGAGAGGATCAATACTCCCTGAGTTTGTCAGGAGATGGTTGCTTCAGGTAGAGGTTGCCATCGTTCGTTGCTTCAACGATGGTGGCGAAATGGCGCTAGTAGCACTATCCTTTTTCTCAAATcctccatcttcttcttcatcttcttcttcttcaacaaccTTTCATCGATACCCTTCACACTCTCTTCAACTCTCATTCCGTTCATCCTCAACTTTATCTCCTCTTTTTCAAACTCAACATTCCTTCTTTTCCCTCCTCACCAAATCACAACCACCAAACAACCACTTTTTCCGCTTCCGCTTCCGTTTTCGACTCTCCACTCACTCATTCTTCCCCTGCCGCTGCAGTAATAACTCCCCCAATGTCGATGTCGAATTCGGGACACTTATCTCTTCATTTCAAGAAATTGGTATTAGCTTTGAGGAAACCAAATTGCTATTGCTCAAATCCAATGAACTTACCTCTATACAACTTAATTCATTGCGTGATCGCGTTCTTTCTTTACACTCTCTTGGGTTAGACCGTGTTTCAATCAATCGTTTAGTTAGGGAGTGTTTAACTATGCTAACTACTAATGAAATTGACCCATTATTGAGTTTTTTGAGAAATGAATTACACGGACAACTTGAGCAAGCAAAGCTCAAGCGTCTTTTATTGAGTAATGAACCGAAAAATTTATCCGCCTTTCCTCAGAAGGTTCGATTGCTTGTTGACCGAGGAGTTCCGGTTAACAAGATTGTACGTGTGCTTAACAAAGTGAATTTGTCAAAGGCAATTTGTAATAGGTCAATAGATGAAATTGAAAGAATTATAGATTTCTTAGAACCCTTTGGTGGTGTTGGTTTGATTGTGAAACACCCTGCAATTCTCAATCATTGTTTGGATTTAAAGCTTATTCCTAGAATCAGTGTTCTTACTGAGTTAAGTGGTGGAGATGAGGATGGTGTTAGGAAAGTGTTGAATAACTTTCCTTTTATCTTGGATTATAGTGTGAAACATGTAGAGGAACATCTACAGTTTCTGAGGTCATTTGCAGACCTAGATGATGAACAAATATTTAAGATAGTGTTGGTGTTTCCGGCTATCTTTACTAATAGCAGAGAGAGGAAACTGCGTCCTAGAATACAATTTCTCAAGGACTGTGGGTTAGACTCCAGCGATATCTTCAAGTTCTTAATCAAAGCACCGCTGTTTTTGAGCGCTTCGTTTCACGAGAACCTTGCGTATAAGTTTGTGTTTCTGGTTAAGATTGGGTATAAATATAGGACGAAAGAGTTGACAATGGCGATTGCGACTTCAACTAGAATAAGCTGTGAGAATATGCAGAAGGTGGTGAGTTTATTCTTGAATTACGGCTTTTCATTTGAAGACATTTTTGCTATGAGTATGAAGCAGCCATTGATACTACGGTATAATCATGCCTCTgtagagaagaagatgaagtactTGATAGAGGAAATGAATCGTGACATTCGGGAGTTGCTGGATTTTCCTGCATTTCTTGGGTACAAGTTTGATGACAGAATTAAGCATAGGTATGAAGTAGAGAAGGGTTTAAATGGGGGACAAATGTCTCTCAATCAGCTTTTAACTGTTTCAAGTAAGAATTTCACCGGCAAACGAAAAAAGGATTCTTCTGTAAAATCTGAACTGGAATAA 1662 0.3761 MRGSILPEFVRRWLLQVEVAIVRCFNDGGEMALVALSFFSNPPSSSSSSSSSTTFHRYPSHSLQLSFRSSSTLSPLFQTQHSFFSLLTKSQPPNNHFFRFRFRFRLSTHSFFPCRCSNNSPNVDVEFGTLISSFQEIGISFEETKLLLLKSNELTSIQLNSLRDRVLSLHSLGLDRVSINRLVRECLTMLTTNEIDPLLSFLRNELHGQLEQAKLKRLLLSNEPKNLSAFPQKVRLLVDRGVPVNKIVRVLNKVNLSKAICNRSIDEIERIIDFLEPFGGVGLIVKHPAILNHCLDLKLIPRISVLTELSGGDEDGVRKVLNNFPFILDYSVKHVEEHLQFLRSFADLDDEQIFKIVLVFPAIFTNSRERKLRPRIQFLKDCGLDSSDIFKFLIKAPLFLSASFHENLAYKFVFLVKIGYKYRTKELTMAIATSTRISCENMQKVVSLFLNYGFSFEDIFAMSMKQPLILRYNHASVEKKMKYLIEEMNRDIRELLDFPAFLGYKFDDRIKHRYEVEKGLNGGQMSLNQLLTVSSKNFTGKRKKDSSVKSELE 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01537 553 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF8, CHLOROPLASTIC 135 546 - -
Tsu07g01537 553 Pfam mTERF 370 538 IPR003690 GO:0003690|GO:0006355
Tsu07g01537 553 Pfam mTERF 156 417 IPR003690 GO:0003690|GO:0006355
Tsu07g01537 553 PANTHER CGI-12 PROTEIN-RELATED 135 546 IPR003690 GO:0003690|GO:0006355
Tsu07g01537 553 Gene3D Transcription termination factor 3, mitochondrial 122 311 IPR038538 -
Tsu07g01537 553 Gene3D Transcription termination factor 3, mitochondrial 312 547 IPR038538 -
Tsu07g01537 553 SMART mt_12 318 349 IPR003690 GO:0003690|GO:0006355
Tsu07g01537 553 SMART mt_12 492 523 IPR003690 GO:0003690|GO:0006355
Tsu07g01537 553 SMART mt_12 390 421 IPR003690 GO:0003690|GO:0006355
Tsu07g01537 553 SMART mt_12 281 312 IPR003690 GO:0003690|GO:0006355
Tsu07g01537 553 SMART mt_12 460 491 IPR003690 GO:0003690|GO:0006355
Tsu07g01537 553 SMART mt_12 354 385 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu07g01537 mTERF 1.4e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01537 - - gmx:100799904 553.518