Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01531 ATGTCCTTAAAGAAGAAACACAAGGCGGAGAAAACAAATTTGTCATCAACTACTCTAAGGGGATTGCCTCAAAATATATCCTATGGTGTATTCAACATCAGCACTTGTGAACGTCAAACCACCACACTTGCTGTTAAAATTCTGGACCTGCAACAAAGCAAAGCCTCTCAGAGTTTTAATGCAGAATGTGAAACTTTGAAAAATGTTCGGCATCGTAATCTGGTCAAGGTGATCACTTCTTGCTCCAGTACTGATTATAAAGGGGATGATTTTAAGGTCCTTGTTATGAAATTCATGCCTAATGGTAATTTAGAGATGAGTTTATATCCTGAAGATCTTGAGTCAGGTTCTTCGCTAACCTTGTTGCAAAGGTTAAACATTGCCATTGATCTTGCATCTGCCATGTACTACTTGCACAATGACTGTGATCCACCAATAGTCCATTGTGATCTCAAACCTGCCAATGTCCTATTAGATGAAGATATGGTTGCACATGTGGCAGATTTTGGATTGGCAAGCTATATCGCCCCAGAATATGGTCTAGGTGGAAAGGTTTCAACTAGTGGTGATGTGTACAGTTTTGGAATCCTAGTTCTAGAGATGTTCATAGCCAAAAAACCAACTGATGAAATGTTCAAAGAAGGATTAAGCATGAACAAATTTGTATTAGACATGGATGACAAGCAATTACTTAAGATTGTTGATCAAAGACTTATCAACCAATTTGAGTATTCAACACAAAATTTCAGCAGTGATtgtaatagtagtagtagtgcATCTGTCGATAACAGTTACAGTGACGGTATCCCAGTTTGGATGCACAAAGCCGAGGAGTGCATAGCTGCTTCAATGAGAGTTGGCTTGCCATGTATATCATATCATCCGAAAGATCGGTGGACAATGAGGGAAGCCTTATCAAAATTTCATGGAATTAAGCAGTCTATACTAGGCTTGTGA 957 0.3804 MSLKKKHKAEKTNLSSTTLRGLPQNISYGVFNISTCERQTTTLAVKILDLQQSKASQSFNAECETLKNVRHRNLVKVITSCSSTDYKGDDFKVLVMKFMPNGNLEMSLYPEDLESGSSLTLLQRLNIAIDLASAMYYLHNDCDPPIVHCDLKPANVLLDEDMVAHVADFGLASYIAPEYGLGGKVSTSGDVYSFGILVLEMFIAKKPTDEMFKEGLSMNKFVLDMDDKQLLKIVDQRLINQFEYSTQNFSSDCNSSSSASVDNSYSDGIPVWMHKAEECIAASMRVGLPCISYHPKDRWTMREALSKFHGIKQSILGL 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01531 318 PANTHER RECEPTOR-LIKE PROTEIN 55 29 172 - -
Tsu07g01531 318 PANTHER RECEPTOR-LIKE PROTEIN 55 174 309 - -
Tsu07g01531 318 SMART serkin_6 31 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01531 318 Gene3D Phosphorylase Kinase; domain 1 25 102 - -
Tsu07g01531 318 SUPERFAMILY Protein kinase-like (PK-like) 39 307 IPR011009 -
Tsu07g01531 318 ProSiteProfiles Protein kinase domain profile. 20 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01531 318 Pfam Protein tyrosine and serine/threonine kinase 35 214 IPR001245 GO:0004672|GO:0006468
Tsu07g01531 318 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Tsu07g01531 318 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 29 172 - -
Tsu07g01531 318 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 174 309 - -
Tsu07g01531 318 Gene3D Transferase(Phosphotransferase) domain 1 103 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01531 Tsu-Chr7 13896656 13898101 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01531 4 313 Receptor kinase-like Gene Family AT3G47570 37.604 4.27e-73 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tsu07g01531 PK_Tyr_Ser-Thr 3.3e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01531 - - mtr:MTR_3g092390 490.73