Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01530 ATGATCTATATAAGATTTATTTTGCTCATATGTTTCCTACTTCGTAATTTTCATGTCATCATTTGTAACAATAGCACCACAGACAAAGATATCCTTCTATCTTTCAAACTACAAGTGACTGATCCATACAATGCTCTATCAAGTTGGAAACAAGATTCTAATCACTGTACTTGGTATGGTGTCAACTGTTCCAAAATTGATGAAAGAGTTCAATCTCTAACCTTATCAGGACTTAGACTTTCTGGTAAACTACCTTCTAATCTCTCCAACCTAACTTATCTTCATACACTTGACCTTTCCAATAACAGTTTTGATGGCCAAATTCCCATCCAATTTTCTCATCTCTCACTCCTTAATATCATTCAATTACCTTACAACAATCTGTCTGGTACACTTCCACCTCAATTGGGTCAACTGCATAATCTACAAAGTTTGGACTTTTCTGTCAATAATCTCACAGGTAAAATCCCTTCATCATTTGGCAATCTCTTTTCTCTTAAAAAGCTTTTCTTGGCAAGGAACAGATTTGTTGGTGAGATTCCCAATGAATTGGGCAATCTCCACAATCTTTCAACACTTCAACTAGAAGAGAACAATTTCACCGGCGAGATTCCTACTTCTTTCTTCTCCAACTTACCTTCCTTGGAGTTCTTATCCTTAACAATGAACAATTTATCAGGCATTTTGCCACAAAATTTTGGTGACGCCTTTCCGAATTTAAGTACACTTACTTTGGCAACTAATAGATTTGAAGGGTTGATTCCTAATTCCATATCCAATTCATCACATCTTCAAATTATTGATCTTTCTAACAATAGATTTCATGGGCCAATACCTCTTTTCACCAACTTGAAAAATCTCACTTATTTGGTTCTTAGTAATAATTTGCTCACTTCCACCACATCATTGAATTTTCAATTCTTTGATTCTCTTAGAAACTCCACTCTGTTGGAAATTTTTATGGTCAATGATAACAACTTGACTGGTGAACTTCCACATTCTGTTGCTTATCTTTCAAGCAACCTACAACAGTTCTGTGTTGCAAATAATAAGCTAAATGGAACTATTCCTCAGGGAATGAAAAAGTTTCAAAATCTCACATCCTTCTCTTTTGAACAGAATAATTTCACCGGCGAGTTACCATTAGAATTAGGAACACTCAAGAAATTGCAGAGGCTATTGATATACCAAAATAGATTGTCTGGAAACAACCAGTTCTCAGGTAGAATTCCCACGAGTATCGGACAATGCGAGAGTTTGACTATACTTGACTTAGAAATGAATAAGCTTGTTGGTGTCATACCAATAGAGATTTTTCAACTCTCTGGCTTAACAGATTTGTACTTGCATGGAAATTCTTTGAACGGTTCGCTTCCTCCTGTATCCAACATGGAGCAGCTACAGATGATGTCTGTTTCGAACAACATGCTGTCGGGGAACATTCCTGAAATCAAAGCAAATGGCTTGAAGATTCTTATGATggaaagaaacaaattcagtGGCTCAATTCCAAATAGTCTAGGGGATTTAGCATCCCTTGAGACACTGGATTTATCATCAAACAATCTTACCGGTTCAATTCCTGAGAGTTTAGAAAATCTCAAATATATGCTCAGCTTAAATTTGTCTTTCAACAAATTGGAAGGAGAGGTTCCTATGAAAGGTGTTTTTATGAACCTAAGCCAAGTTGATCTCCAAGGTAACAACAAACTATGTGGCCTTAACAATCAAGTTATGCACAAGTTAGGAGTCACTTTGTGTGTTGCAggtaagaaaaagaagagaaacatTTTACTTCCTATCATACTCGGGATTATAGGCGCGACGGTTTTGTTCACTTCAATGATCTATCTACTGTGGCGGCTAATGTCCTTAAAGAAGAAACACAAGGAGGAGATAAGAACTTTGTCATTAATTCCTCTAAAGGGGCTGCCTCAAAATATATCCTATGGTGATATTAGGCTTGCAACAAACAATTTTTCAGCAGCAAACATGGTTGGAAAAGGAGGCTTTGGTTCTGTTTACAAGGGTGTTTTCAACATCAGCACTTGTGAAAGTCAAACTACCACACTTGCTGTTAAAATTCTGGACCTGCAACAAAGCAAAGCCTCTCAGAGTTTTAATGCAGAATGTGAAACTTTGAAAAATGTTCGGCATCGGAATCTGGTCAAGGGGGATGATTTTAAGGCCCTTGTTATGCAATTCATGCCTAATGGTAATTTAGAGATGAGTTTATACCCTGAAGATCTTGAGTCCGGTTCTTCGCTAACCTTGTTGCAAAGGTTAAACATTGCCATTGATGTTGCATCTGCCATGTACTACTTGCACAATGACTGTGATCCACCAATAGTCCATTGTGATCTCAAACCTGCCAATGTCCTAATAGATGAAGAAATGGTTGCACATGTGGCAGATTTTGGATTGGCAAGGTTTCTGTCTCAAAATCCATCAGAGAAACATAGCAGCACTCTAGAATTGAAGGGATCGATCGGCTATATCGCCCCAGAATATGGTCTAGGTGGAAAGGTTTCAACTAGTGGTGATGTGTACAGTTTTGGAATCCTACTTCTAGAGATGTTCATAGCCAAAAAACCAACTGATGAAATGTTCAAAGAAGGATTAAACATGAACAAATTTGTATTAGACATGGATGACAAGCAATTACTTAAGATTGTTGATCAAAGACTTATCAACCAATTTGAGTATTCAACACAAAATTTCAGTAGTGATtgtaatagtagtagtagtgcGTCTGTCGACAACAGTTACAGTGACGGTATCCCAGTTTGGATGCACAAAGCTGAGGAGTGCATAGCTGCTTCAATGAGAGTTGGCTTGTCATGTATATCATATCATCCTAAAGATCGATGGACAATGAGAGAAGCCTTATCAAAATTGCATGGAATTAAGCAGTCTATACTAGGCTTGTAA 2931 0.3664 MIYIRFILLICFLLRNFHVIICNNSTTDKDILLSFKLQVTDPYNALSSWKQDSNHCTWYGVNCSKIDERVQSLTLSGLRLSGKLPSNLSNLTYLHTLDLSNNSFDGQIPIQFSHLSLLNIIQLPYNNLSGTLPPQLGQLHNLQSLDFSVNNLTGKIPSSFGNLFSLKKLFLARNRFVGEIPNELGNLHNLSTLQLEENNFTGEIPTSFFSNLPSLEFLSLTMNNLSGILPQNFGDAFPNLSTLTLATNRFEGLIPNSISNSSHLQIIDLSNNRFHGPIPLFTNLKNLTYLVLSNNLLTSTTSLNFQFFDSLRNSTLLEIFMVNDNNLTGELPHSVAYLSSNLQQFCVANNKLNGTIPQGMKKFQNLTSFSFEQNNFTGELPLELGTLKKLQRLLIYQNRLSGNNQFSGRIPTSIGQCESLTILDLEMNKLVGVIPIEIFQLSGLTDLYLHGNSLNGSLPPVSNMEQLQMMSVSNNMLSGNIPEIKANGLKILMMERNKFSGSIPNSLGDLASLETLDLSSNNLTGSIPESLENLKYMLSLNLSFNKLEGEVPMKGVFMNLSQVDLQGNNKLCGLNNQVMHKLGVTLCVAGKKKKRNILLPIILGIIGATVLFTSMIYLLWRLMSLKKKHKEEIRTLSLIPLKGLPQNISYGDIRLATNNFSAANMVGKGGFGSVYKGVFNISTCESQTTTLAVKILDLQQSKASQSFNAECETLKNVRHRNLVKGDDFKALVMQFMPNGNLEMSLYPEDLESGSSLTLLQRLNIAIDVASAMYYLHNDCDPPIVHCDLKPANVLIDEEMVAHVADFGLARFLSQNPSEKHSSTLELKGSIGYIAPEYGLGGKVSTSGDVYSFGILLLEMFIAKKPTDEMFKEGLNMNKFVLDMDDKQLLKIVDQRLINQFEYSTQNFSSDCNSSSSASVDNSYSDGIPVWMHKAEECIAASMRVGLSCISYHPKDRWTMREALSKLHGIKQSILGL 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01530 976 PANTHER RECEPTOR-LIKE PROTEIN 55 163 967 - -
Tsu07g01530 976 SUPERFAMILY L domain-like 47 401 - -
Tsu07g01530 976 PRINTS Leucine-rich repeat signature 94 107 - -
Tsu07g01530 976 PRINTS Leucine-rich repeat signature 510 523 - -
Tsu07g01530 976 ProSiteProfiles Leucine-rich repeat profile. 286 307 IPR001611 GO:0005515
Tsu07g01530 976 SMART LRR_typ_2 91 114 IPR003591 -
Tsu07g01530 976 SMART LRR_typ_2 187 211 IPR003591 -
Tsu07g01530 976 SMART LRR_typ_2 510 534 IPR003591 -
Tsu07g01530 976 SMART LRR_typ_2 237 260 IPR003591 -
Tsu07g01530 976 SMART LRR_typ_2 284 310 IPR003591 -
Tsu07g01530 976 SMART LRR_typ_2 441 465 IPR003591 -
Tsu07g01530 976 SMART LRR_typ_2 212 235 IPR003591 -
Tsu07g01530 976 SMART LRR_typ_2 163 186 IPR003591 -
Tsu07g01530 976 SMART LRR_typ_2 139 162 IPR003591 -
Tsu07g01530 976 Gene3D Transferase(Phosphotransferase) domain 1 736 973 - -
Tsu07g01530 976 ProSiteProfiles Leucine-rich repeat profile. 512 535 IPR001611 GO:0005515
Tsu07g01530 976 Gene3D Ribonuclease Inhibitor 25 178 IPR032675 -
Tsu07g01530 976 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 90 - -
Tsu07g01530 976 SMART LRR_sd22_2 284 305 - -
Tsu07g01530 976 SMART LRR_sd22_2 139 165 - -
Tsu07g01530 976 SMART LRR_sd22_2 510 536 - -
Tsu07g01530 976 SMART LRR_sd22_2 339 368 - -
Tsu07g01530 976 SMART LRR_sd22_2 441 466 - -
Tsu07g01530 976 SUPERFAMILY Protein kinase-like (PK-like) 637 966 IPR011009 -
Tsu07g01530 976 Pfam Leucine rich repeat 488 547 IPR001611 GO:0005515
Tsu07g01530 976 ProSiteProfiles Protein kinase domain profile. 660 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01530 976 PANTHER RECEPTOR-LIKE PROTEIN 55 1 90 - -
Tsu07g01530 976 SMART serkin_6 660 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01530 976 ProSitePatterns Serine/Threonine protein kinases active-site signature. 783 795 IPR008271 GO:0004672|GO:0006468
Tsu07g01530 976 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Tsu07g01530 976 Pfam Leucine Rich Repeat 141 163 IPR001611 GO:0005515
Tsu07g01530 976 Pfam Protein tyrosine and serine/threonine kinase 663 872 IPR001245 GO:0004672|GO:0006468
Tsu07g01530 976 Gene3D Phosphorylase Kinase; domain 1 642 735 - -
Tsu07g01530 976 SUPERFAMILY L domain-like 209 576 - -
Tsu07g01530 976 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 80 187 - -
Tsu07g01530 976 ProSitePatterns Protein kinases ATP-binding region signature. 666 694 IPR017441 GO:0005524
Tsu07g01530 976 Gene3D Ribonuclease Inhibitor 234 280 IPR032675 -
Tsu07g01530 976 Gene3D Ribonuclease Inhibitor 179 233 IPR032675 -
Tsu07g01530 976 PANTHER RECEPTOR-LIKE PROTEIN 55 80 187 - -
Tsu07g01530 976 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 163 967 - -
Tsu07g01530 976 Gene3D Ribonuclease Inhibitor 281 582 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01530 Tsu-Chr7 13872990 13876421 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01530 27 971 Receptor kinase-like Gene Family AT3G47570 38.697 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tsu07g01530 PK_Tyr_Ser-Thr 1.1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01530 - - mtr:MTR_3g092390 1546.18