Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01519 ATGGGTTCAACAGGTGAAACTCAAATAACACCAACCCATGTTAAcgatgaagaagcaaatctcTTTGCTATGCAACTAGCAAGTGCTTCTGTTCTTCCAATGGTTTTAAAATCAGCTCTTGAACTTGATCTTTTAGAAATCATTGCTAAAGCTGGTCCTGGTGCTCATCTTTCTCCCGTTGAAATTGCTTCTCAGCTACCAACAACTAACCCTGATGCACCAGTTATGTTAGATAGAATCTTGCGGCTTTTGGCTTGTTATAATATTCTTACTTGTTCTTTAAAGACTTTAGATGATGGAAAGGTTCAGAGACTCTATGGTTTGGCTACTGTTGCTAAGTATTTGGTTAAGAATGAAGATGGTGTTTCTATTTCTGCTCTTAATCTCATGAATCAAGATAAAGTACTCATGGAAAGCTGGTACCACCTAAAAGATGCTGTCCTTGATGGAGGCATTCCATTCAACAAAGCTTATGGAATGACAGCCTTTGAATACCATGGAACTGATCCAAGGTTTAACAAAGTTTTCAACAAGGGAATGTCTGATCACTCTACCATCACAAtgaaaaaaattcttgaaaCCTACACTGGTTTTGAAGGCCTTAAATCTCTTGTTGATGTTGGTGGTGGAACTGGAGCTGTAATTAACACCATTGTCTCTAAGTATCCCACTATTAAAGGcattaattttgatttacctCATGTTATTGGAGATGCTCCTTCTTATCCagGAGTGGAGCATGTTGGTGGAGACATGTTTGTCAGTGTTCCAAAGGCTGATGCTGTGTTTATGAAGTGGATTTGTCATGATTGGAGTGATGAGCACTgcttgaaatttttgaaaaactgttATGAGGCACTTCCAGACAATGGAAAAGTGATTGTGGCAGAATGCATTCTTCCAGTGGCACCAGACACAAGTTTGGCAACAAAAGGTGTGGTTCACATTGATGTGATCATGTTGGCTCATAATCCAGGTGGGAAAGAGAGAACACAGAAAGAGTTTGAAGATCTTGCCAAAGGTGCTGGattccaaggtttcaaagtCCATTGTTCTGCTTTTAACACATACATCATGGAATTTCTTAAGAAGGTTTAA 1098 0.3634 MGSTGETQITPTHVNDEEANLFAMQLASASVLPMVLKSALELDLLEIIAKAGPGAHLSPVEIASQLPTTNPDAPVMLDRILRLLACYNILTCSLKTLDDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIGDAPSYPGVEHVGGDMFVSVPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDTSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCSAFNTYIMEFLKKV 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01519 365 Pfam Dimerisation domain 34 85 IPR012967 GO:0046983
Tsu07g01519 365 SUPERFAMILY "Winged helix" DNA-binding domain 15 119 IPR036390 -
Tsu07g01519 365 CDD AdoMet_MTases 204 295 - -
Tsu07g01519 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 361 IPR029063 -
Tsu07g01519 365 Pfam O-methyltransferase domain 140 345 IPR001077 GO:0008171
Tsu07g01519 365 PANTHER BNAA10G07270D PROTEIN 1 364 - -
Tsu07g01519 365 PIRSF O-mtase 1 363 IPR016461 GO:0008168
Tsu07g01519 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 363 IPR016461 GO:0008168
Tsu07g01519 365 Gene3D - 1 115 IPR036388 -
Tsu07g01519 365 PANTHER O-METHYLTRANSFERASE 1 364 IPR016461 GO:0008168
Tsu07g01519 365 Gene3D Vaccinia Virus protein VP39 116 363 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01519 Tsu-Chr7 13757918 13763154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01519 1 365 Monolignol Biosynthesis Gene Families AT5G54160 77.260 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01519 K13066 - gmx:100806525 686.797