Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01504 atggGTTCCCATTCTCTTGAGTGTTGTCCATCGCTCGACGATAATGGGATGATGGTGTTGAATCTGAATTCGTTTCCAGTAGGGGTCCGATTCCAACCTACGGACGAGGATCTTATCAATTACTACCTACGTTCAAAGATCAATGGTAATGGTGAGAAGGTTTGGGTTATCCGAGAAATTGATATCTGCAAATGGGAACCCTGGGATATGCCTGATTTGTCAGTGGTAAAGAGCAAGGATCCAGAGTGGTTCTTCTTCTGTCCTCGGGATCGAAAGTATCCAAACGGGCATCAAAGGAAGAGGAAAACAAATCGTGGGTTCTGGAAGCCAACAGGACATGATCGTAAAATTATGTCTGGAGCAATCATGATTGGAACGAAGAAGACTCTAGTCTTCTACAGTGGTTGTGCACCAAGTAGGAAGAGGACTAATTGGGTTATGCACGAGTATCGTCCCATCCTGAAGGAGCTTGATGGTACCAACCCAGGGCAGAAGCCATATGTCCTCTGCCGATTATTTAAGAAGAATGATGACAGCCTTGAAGTTTCAAACTGTGCTGAAGTGGAGCAGACTACTTCAGCTCCTTTGGCTGCCAATTCTTCTTCTGAAGAAATACAATCTGATCCATCTCCTGTTACAACATCCACATCACAGGTCATGGAAAAGGATATGCAGCTGGCCATTATCCCTGATGTCTCTGAGGAAGCTCCCTTGGCTGCCAATTCTTATTCTGAAGAAATACAATCTGATCCAGCTCCTGTTTCAGCATCCACAAAACAGGTCATGGAAGAGGATATGCTGCTGGCCGTTATCCCTGATGTCTCTGGGGAAGCTCCTTTGGCTGCCAATTCTTCTTCTGAAGAAATACAATCTGATCCAGCTCCTGTTACAGTATCCACACCACAGGTCATGGAAGAGGATATGCTGCTGGCCGTTATCCCTGATGTCTCTGGGGAAGCTCCATTGGCTGCCAATTATTCTTCTGAAGAAACACAATCTGATCCAGCTCCTgttacagcatccacatcaCAGGTCATGGACGAGGATATGCAGTTGGCCGTTATCCCTGATGCCTCTGGGGAAACCATATCTACAGAGGAGGATCAGACATCTAACTTTGGCATGTATTATAACCCAAGAGACGGTCAATTATTTGATGACAGATTTTTCTCCCCCAATCTGGCGCATACGCTACCAGAATTTAATTATCCAGCATACAATGAGTCAGACGTTCTATGGGAGCTTCAATATGGCACTAATGATACATACATTTCGGACTTCTTAAATTCTAATCTTAATTGGGATCAACTTCCCTGTCAGGAGTCTAGTAGTCACCAGCAAACCTTCCCCTTGTTTAATGTTAACGACAATGGTTCAGGAAGCAACTCAGTTGCTGGGCCCAATATGACTTATATGACTGCTGAAAGAGGAATCATAAGAAGGACCTGA 1449 0.4403 MGSHSLECCPSLDDNGMMVLNLNSFPVGVRFQPTDEDLINYYLRSKINGNGEKVWVIREIDICKWEPWDMPDLSVVKSKDPEWFFFCPRDRKYPNGHQRKRKTNRGFWKPTGHDRKIMSGAIMIGTKKTLVFYSGCAPSRKRTNWVMHEYRPILKELDGTNPGQKPYVLCRLFKKNDDSLEVSNCAEVEQTTSAPLAANSSSEEIQSDPSPVTTSTSQVMEKDMQLAIIPDVSEEAPLAANSYSEEIQSDPAPVSASTKQVMEEDMLLAVIPDVSGEAPLAANSSSEEIQSDPAPVTVSTPQVMEEDMLLAVIPDVSGEAPLAANYSSEETQSDPAPVTASTSQVMDEDMQLAVIPDASGETISTEEDQTSNFGMYYNPRDGQLFDDRFFSPNLAHTLPEFNYPAYNESDVLWELQYGTNDTYISDFLNSNLNWDQLPCQESSSHQQTFPLFNVNDNGSGSNSVAGPNMTYMTAERGIIRRT 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01504 482 MobiDBLite consensus disorder prediction 190 215 - -
Tsu07g01504 482 Pfam No apical meristem (NAM) protein 26 151 IPR003441 GO:0003677|GO:0006355
Tsu07g01504 482 ProSiteProfiles NAC domain profile. 25 175 IPR003441 GO:0003677|GO:0006355
Tsu07g01504 482 SUPERFAMILY NAC domain 13 175 IPR036093 GO:0003677|GO:0006355
Tsu07g01504 482 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 19 238 - -
Tsu07g01504 482 Gene3D NAC domain 34 179 IPR036093 GO:0003677|GO:0006355
Tsu07g01504 482 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 19 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01504 Tsu-Chr7 13619107 13624335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01504 17 210 NAC Transcription Factor Family AT4G35580 58.974 1.31e-79 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tsu07g01504 NAM 8.7e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01504 - - gmx:100777071 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02690 05 36828682 36832313 Tsu07g01504 07 13619107 13624335 PCT