Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01484 atggagACTCTGAAAGCAGCGATTCCAAATGAACTAAAACAAGCAATTAGGGATAGCAATGTAGAACATACTCTTCGCGATACTTGTTCTTCtcttcatcaattctttcttcattttcaaccaTTTCATCAGATAGTGACTGAACTTGCGGACCCAAGCTATGCATTGTGCGGTAAGAGTAAAGAAGCTGCTTTGGAATATAAGCTGCTTGGTAATCAATGCTTCTCTGACGCTGATTATGTTAAGGCTCTGGATTATTATACTCAGGCATTGCGCAGGGCTCCTTTTAAAGTTGGTGACACGAAAACTAATCTGGTTGCAACATTGTATATCAATCGAGCTACTGTATTGCATAAAATGAATCTTTTAGTAGAATGTTTGCGAGACTGCAATCGAGCTCTTCAGATATGTCCAAGCTATGCAAAGGCATGGTATAGAAGAGGAAAGGCAAATGTTTCATTGGGAAATAATAAAGATGCGATCTGTGACTTAAATATAGCTAAGAGTGTCGAATCATCAACCGGCGGGAAGAGACAAGTAGAAAGTGaactgaaaattattttagaccAATCCAAGAACACAAATATAGTAGCACAGCCGCAACATAAGGGGAACAGCTTGAGTACAGTGGGTGAGATGCCTCAAATAAAGCTGCGAAGTGTCTCTGTGCCTGATAAAGGAAGAGGCATGGTGCCGTCACATGATGTTTCACCAGGTTCGTTGGTTCATGCTGAAGAACCTTATGCTACAATAATATTAAAGCAATGTCGGGAAACTCATTGCCATTATTGCTTTAATGACCTACCTGCTGATAGAGTTCCTTGTATATCATGTTCAATACCATTGTATTGCTCCCAGCAATGCCAGATAAAGGCAGGTGGGGAAATGTTCAGGATTTCCACAGAAGATAGTAATATTCTTAAAAACTTACCCGGCGATATTGGAAAATATGCTGCTGAAGTGATTCAATACAATGATTGTGAACAAAAGATTGATGATGTTAGTGAACATAAACATGAATGTCAAGGGGTACATTGGCCTGCTGTACTGCCTTCTGAAATAGTTTTGGCCGGCAGAGTTCTAGCGAAGTTTTTGTCAAAGAGCTCGTCTGGAGACATCGAAAGTTTTGTGGAAAAGCTGGAACTTTCTCATTGTTACGAACATATGCCATTTGAAAGTAAATTGGATTCACATATATACGCCATTGTATTGTTATATTGTCTTAAACACTCTTATGGAACTATGTTTTCCATCAACGGAATCTCTATATCACAGGTTGTCATAATTATATCTCAGATTAAAGTGAATTGTATGACTGTTGTTCGTTTAAAATCAATAGACGCTCATGGACTGTCAGATCAATCTGGAGGATTTCCATTTCATTCCAGTGTACATTTAACTAGTAATGTGGAACAGGTCAGAGTGGGTAAAGCTATTTATAAAGCTGGCAGTTTATTTAACCATTCTTGCCAACCAAATGTTCATGCATATTTTCTTTCACGCACACTCTATTTACGAACAACAAAAGTTGTAGCAGCTGGGTGTCAGCTGGAATTGTCTTATGGTCCACAGGTTGGGTTGTGGGATTGTAAAGATCGCCAAAATTTTCTCAAAGATGAATACGCATTTCATTGTCAATGTACTGGTTGTTCAGAAGTTAATCTATCTGACATTGTCCTCAATGCTTTTCATTGTGTCAAACCAAATTGTTCCGGCGCAGTGTTGGAAAGCAGAGTACTTGAGTGTGAAAAGCAGAAAATCAAACACTTCCCTTTTGCTAACAAAGTTATCAAGAATGATGACATCTATGAAGTATGTCTTCATACATTTAACCAAAATGACGCCTCTATTCATATTCAACCTGGATACTGTTTGAATTGTGGGTCTTACTCTGATCTGGAGTCTTCACGTACCACAGTTGATAAGGCCTTAATATGTATTAAAAGGCTGCAGGATGCAATACAGTCAAAAGACATTTCAAATACTTCCATTTCAGACGCTTTGAGATCTCTTCATTTGCTGAGATCAAATTTGCATGCATACAATAAGGTTATTGCAGAGGCAGAAGACAACATAGCCCAAGCTTTTTGTTTAGTGGGAGAATTACAATTATCTGTGGATCATTGTAAAGCATCTATTCAgATTCTGGAGAAGCTATACGATCCTGATGATATTGTTATTGCTTATGAACTTGTGAAGCTTTCATCCGTCCAACTTTCCTTGGGTGACGATAGTGCTGTCGACAGCATTAATCGGATAGGTGCTATCTTCTCGCGTTATTATGGACTTCATGCAGACTTGGTCTTTCCCTATCTTCAGTACCTTAGGAGAGAAATTTAG 2340 0.3778 METLKAAIPNELKQAIRDSNVEHTLRDTCSSLHQFFLHFQPFHQIVTELADPSYALCGKSKEAALEYKLLGNQCFSDADYVKALDYYTQALRRAPFKVGDTKTNLVATLYINRATVLHKMNLLVECLRDCNRALQICPSYAKAWYRRGKANVSLGNNKDAICDLNIAKSVESSTGGKRQVESELKIILDQSKNTNIVAQPQHKGNSLSTVGEMPQIKLRSVSVPDKGRGMVPSHDVSPGSLVHAEEPYATIILKQCRETHCHYCFNDLPADRVPCISCSIPLYCSQQCQIKAGGEMFRISTEDSNILKNLPGDIGKYAAEVIQYNDCEQKIDDVSEHKHECQGVHWPAVLPSEIVLAGRVLAKFLSKSSSGDIESFVEKLELSHCYEHMPFESKLDSHIYAIVLLYCLKHSYGTMFSINGISISQVVIIISQIKVNCMTVVRLKSIDAHGLSDQSGGFPFHSSVHLTSNVEQVRVGKAIYKAGSLFNHSCQPNVHAYFLSRTLYLRTTKVVAAGCQLELSYGPQVGLWDCKDRQNFLKDEYAFHCQCTGCSEVNLSDIVLNAFHCVKPNCSGAVLESRVLECEKQKIKHFPFANKVIKNDDIYEVCLHTFNQNDASIHIQPGYCLNCGSYSDLESSRTTVDKALICIKRLQDAIQSKDISNTSISDALRSLHLLRSNLHAYNKVIAEAEDNIAQAFCLVGELQLSVDHCKASIQILEKLYDPDDIVIAYELVKLSSVQLSLGDDSAVDSINRIGAIFSRYYGLHADLVFPYLQYLRREI 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01484 779 Pfam SET domain 227 522 IPR001214 GO:0005515
Tsu07g01484 779 SUPERFAMILY SET domain 205 552 IPR046341 -
Tsu07g01484 779 ProSiteProfiles TPR repeat profile. 64 97 IPR019734 GO:0005515
Tsu07g01484 779 SMART tpr_5 686 719 IPR019734 GO:0005515
Tsu07g01484 779 SMART tpr_5 141 174 IPR019734 GO:0005515
Tsu07g01484 779 SMART tpr_5 107 140 IPR019734 GO:0005515
Tsu07g01484 779 SMART tpr_5 64 97 IPR019734 GO:0005515
Tsu07g01484 779 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 778 - -
Tsu07g01484 779 Coils Coil 671 691 - -
Tsu07g01484 779 ProSiteProfiles SET domain profile. 214 522 IPR001214 GO:0005515
Tsu07g01484 779 Gene3D SET domain 415 521 IPR046341 -
Tsu07g01484 779 Gene3D Tetratricopeptide repeat domain 527 776 IPR011990 GO:0005515
Tsu07g01484 779 Gene3D Tetratricopeptide repeat domain 39 199 IPR011990 GO:0005515
Tsu07g01484 779 SUPERFAMILY TPR-like 60 167 IPR011990 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Tsu07g01484 SET 7.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01484 K24634 - gmx:100783548 1205.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01484 07 13361666 13369772 Tsu07g01484 07 13361666 13369772 ECH