Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01475 ATGGAAGCATTGGTATGCAGAAAATTGGGTGACCCAACGGTGAACGTAGAAGATGATAACAGCCCAATAATTGTATCCAAAAATCATCCAATCCCTCAATTGAATTCTCCTACATCGGTGAGAGTTAGAGTCAAAGCTACAAGCTTGAATTTCGCTAATTACTTGCAGATTCTTGGCAAGTATCAAGAGAAACCCCCTTTGCCTTTCATTCCTGGATCTGATTTTTCAGGCATCGTTGATTCCGTTGGTTCCAAAGTTACCAATTTTCGTGTTGGAGACCCTGTTTGTTCTTTTGTAGCTCTTGGTTCTTATGCTCAGTATATAGTTGTTGATCAGAACGAATTGTTTCGTGTGCCGCAAGGTTGCGATTTGGTTGCTGCTGGAGCACTTGCTGTGGCATTTGGCACTTCACATGTTGCACTTGTTCATAGAGCTCGGTTGACATCTGGTCAGGTATTGTTGGTTTTGGGTGCAGCAGGAGGTGTGGGTCTTGCAGCTGTGCAAATTGGAAAAGCATGCGGAGCCGTTGTCATTGCTGTTGCTAGAGGAGCTGAAAAGGTGCAGCTTTTGAAATCACTTGGTGTGGATCATGTGGTGGACTTGGGTAATGAAAATGTCACCGAGAGTGTCAAAGAGTTCCTTAAGGTCAGAAGGCTTAAAGGGGTCGATGTCCTGTATGACCCAGTTGGAGGCAAGCTTAACAAAGAATGTTTGCGGCTTCTGAAATGGGGAGCTAACATTCTAATAATTGGGTTTGCAAGTGGAGAAGTTCCTGTCATCCCTGCTAACATAGCTCTTGTTAAGAATTGGACAGTACATGGCCTGTATTGGGGTAGTTATAAAATACACCGCCCAGTTGTTCTTGAAGACTCTCTGAAGGAGCTACTGTCTTGGTTGGCAAAAGGCTTGATTTCCGTTCACATTTCTCATTCTTACAGCCTAGCAGAGGCCAACCTCGCCTTCTCTGCCATAAAAGATAGGAAAGTCATAGGGAAGGTGATGATTGTATTCGATGAGAAAAGTACAAGATCTAAGCTGTGA 1041 0.439 MEALVCRKLGDPTVNVEDDNSPIIVSKNHPIPQLNSPTSVRVRVKATSLNFANYLQILGKYQEKPPLPFIPGSDFSGIVDSVGSKVTNFRVGDPVCSFVALGSYAQYIVVDQNELFRVPQGCDLVAAGALAVAFGTSHVALVHRARLTSGQVLLVLGAAGGVGLAAVQIGKACGAVVIAVARGAEKVQLLKSLGVDHVVDLGNENVTESVKEFLKVRRLKGVDVLYDPVGGKLNKECLRLLKWGANILIIGFASGEVPVIPANIALVKNWTVHGLYWGSYKIHRPVVLEDSLKELLSWLAKGLISVHISHSYSLAEANLAFSAIKDRKVIGKVMIVFDEKSTRSKL 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01475 346 Gene3D - 34 331 - -
Tsu07g01475 346 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 1 336 - -
Tsu07g01475 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 122 288 IPR036291 -
Tsu07g01475 346 Pfam Alcohol dehydrogenase GroES-like domain 38 97 IPR013154 -
Tsu07g01475 346 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 150 171 IPR002364 GO:0008270|GO:0016491
Tsu07g01475 346 SMART PKS_ER_names_mod 17 335 IPR020843 GO:0016491
Tsu07g01475 346 Gene3D - 133 280 - -
Tsu07g01475 346 SUPERFAMILY GroES-like 27 148 IPR011032 -
Tsu07g01475 346 CDD QOR1 1 335 - -
Tsu07g01475 346 Pfam Zinc-binding dehydrogenase 161 300 IPR013149 -
Tsu07g01475 346 PANTHER QUINONE OXIDOREDUCTASE-LIKE PROTEIN 2 1 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01475 Tsu-Chr7 13302437 13307040 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01475 68 266 Monolignol Biosynthesis Gene Families AT1G72680 25.424 1.27e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01475 K00344 - gmx:100817700 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01475 07 13302437 13307040 Tsu07g01475 07 13302437 13307040 ECH