Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01470 ATGAAGTTGCAATTCTCTATTGTTGTTGCTCTTGTTCTATTAATCTCCCTACTCTCTCTATTTGGCTTGATTGTAACCGCTGCTGACTTGAACTCCGACCGACAAGCTCTATTAGAGTTTGCTTCTGCTGTCCCGCACGCTCCAAGGCTTAGCTGGAATGACTCTTCTTCAATTTGTACCTCATGGATTGGTGTTACTTGCAATTCAAACGGAACACGTGTCATAGGCATCCATCTTCCAGGAATCGGATTAACCGGTTCGATTCCTGAGAATACTATAGGAAAACTAGATGCTCTAAGAGTTCTAAGCCTTCATTCCAATGGTCTTGTAGGGAATCTTCCTTCTAACATCCTCTCAATTCCTTCCCTTCAATTTGCACACCTGCAGAAAAACAACTTCTCGGGTCTAATTCCTTCTTCTGTCTCTCCTAAACTAACTGCATTGGATATTTCCTTTAACTCCTTCTCTGGAAGTATACCACCTACATATCAGAATCTTAGAAGACTCACTTGGTTGTATATCCAAAACAATTCTATATCGGGAACTATTCCCGACTTCAACCTTCCAAGTCTCAAATACTTGAATTTGAGTAATAATAACTTGAATGGATCAATTCCAAATTCCATCAAAACATTCCCTTCTACTTCTTTTGTTGGAAACTCTCTCTTATGTGGTCCGCCTCTTCTAAATGATTGTTCTTCAATCTCCCCGTCTCCATCTCCTTCCCCTGATTCCACACAAGACCAAAAAGCTAAGACCCCCCATAAGAAAAGCTTTGGCATAGCTGTTATACTTGCTCTAGTCATTGGAGGAATTGCATTCCTCTCGCTACTAGTTTTAGTGTTCTTTGTATGCttcttgaaaaagaaaaacaataaaagaagtGGCATACTTAAAGGAAAGGCTTCTTCTTGTGCTGGAAAGCCCGAAATTTCGAAGAGTTTCGGGAGCGGAGTGCAAGCTGCTGAAAAGAACAAGTTGTTTTTCTTTGAAGGTTCCTCTTATACCTTTGACCTTGAAGATTTACTAAAGGCTTCAGCTGAAGTTCTTGGAAAAGGAAGCTATGGTACAGCATACAAGGCTGTTTTGGAAGAGGGAGTGACAATGGTAGTTAAAAGGTTGAAGGAAGTTGTGGTAGGAAAGAAGGAATTTGAGCAACAGTTGGATATTGTTGGGAGAATCGGACGCCATCCCAATGTCATGCCCCTTAGAGCTTATTACTATTCCAAAGATGAGAAACTTTTGGTTTACAGTTACATGCCAGGAGGAAGCTTGTTTTTCTTGTTGCATGGAAACAAAGGTGCAGCAAGAACACCATTTGATTGGGATTCAAGAGTGAAGATTGCACTTGGAACGGCTAAAGGAATTGCTTTCATTCACACTGAAGGAGGTCCAAAATTTACACATGGCAACATCAAATCAACCAATATACTAATAACAGAAGAATTTGATAGCTGCATTTCTGATGTTGGGTTACCTCCTTTGATGAATGCACCAGCAACAATGTCTAGAACAAATGGATATAGAGCTCCAGAAGTAACCGATTCCAAAAAGATCACACAAAAATCCGATGTATACAGCTTCGGCGTGCTGCTACTCGAAATGTTAACAGGCAAGATTCCACTGAGATATCCTGGTTATGAAGACGTTGTCGATCTTCCAAGATGGGTTAGGTCTGTTGTGAGAGAAGAATGGACAGCTGAAGTATTTGATGAGGAACTTCTTAGAGGACAATATGTTGAAGAGGAAATGGTTCAGATGCTTCAGATTGCACTTGCATGTGTGGCTAAGACACCGGATACGAGGCCTAGAATGGATGAAGCTGTTAGAATGATTGAGGAAATCAAACATCCTGAGTTTAAGATCAGGACATCGTCCGAGTCTGAATATTCTAATGTGCAGACACCATAA 1911 0.4035 MKLQFSIVVALVLLISLLSLFGLIVTAADLNSDRQALLEFASAVPHAPRLSWNDSSSICTSWIGVTCNSNGTRVIGIHLPGIGLTGSIPENTIGKLDALRVLSLHSNGLVGNLPSNILSIPSLQFAHLQKNNFSGLIPSSVSPKLTALDISFNSFSGSIPPTYQNLRRLTWLYIQNNSISGTIPDFNLPSLKYLNLSNNNLNGSIPNSIKTFPSTSFVGNSLLCGPPLLNDCSSISPSPSPSPDSTQDQKAKTPHKKSFGIAVILALVIGGIAFLSLLVLVFFVCFLKKKNNKRSGILKGKASSCAGKPEISKSFGSGVQAAEKNKLFFFEGSSYTFDLEDLLKASAEVLGKGSYGTAYKAVLEEGVTMVVKRLKEVVVGKKEFEQQLDIVGRIGRHPNVMPLRAYYYSKDEKLLVYSYMPGGSLFFLLHGNKGAARTPFDWDSRVKIALGTAKGIAFIHTEGGPKFTHGNIKSTNILITEEFDSCISDVGLPPLMNAPATMSRTNGYRAPEVTDSKKITQKSDVYSFGVLLLEMLTGKIPLRYPGYEDVVDLPRWVRSVVREEWTAEVFDEELLRGQYVEEEMVQMLQIALACVAKTPDTRPRMDEAVRMIEEIKHPEFKIRTSSESEYSNVQTP 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01470 636 ProSitePatterns Protein kinases ATP-binding region signature. 350 381 IPR017441 GO:0005524
Tsu07g01470 636 Gene3D Phosphorylase Kinase; domain 1 310 419 - -
Tsu07g01470 636 Pfam Leucine Rich repeats (2 copies) 168 206 IPR025875 -
Tsu07g01470 636 SUPERFAMILY L domain-like 33 228 - -
Tsu07g01470 636 CDD STKc_IRAK 350 615 - -
Tsu07g01470 636 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Tsu07g01470 636 PANTHER RECEPTOR-LIKE KINASE 8 635 - -
Tsu07g01470 636 Gene3D Transferase(Phosphotransferase) domain 1 420 634 - -
Tsu07g01470 636 SUPERFAMILY Protein kinase-like (PK-like) 348 615 IPR011009 -
Tsu07g01470 636 ProSiteProfiles Leucine-rich repeat profile. 190 212 IPR001611 GO:0005515
Tsu07g01470 636 Gene3D Ribonuclease Inhibitor 144 234 IPR032675 -
Tsu07g01470 636 ProSiteProfiles Protein kinase domain profile. 344 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01470 636 Gene3D Ribonuclease Inhibitor 31 143 IPR032675 -
Tsu07g01470 636 Pfam Protein kinase domain 348 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01470 636 PANTHER OS05G0588300 PROTEIN 8 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01470 Tsu-Chr7 13264691 13267610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01470 28 616 Receptor kinase-like Gene Family AT5G58300 60.708 0.0 727
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu07g01470 Pkinase 3.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01470 - - aprc:113868460 998.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02657 05 36499149 36501636 Tsu07g01470 07 13264691 13267610 PCT