Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01459 ATGGTGAAGAAACAATATTGTAATTTAGCACGAAGGTTGAAGCTTTTTATCCCTTTGTTTGATGAGATTAGGGATATGAATGATTCAATTCCGATTGATATTTCAAAAGCTGTGATTTTGTTCAAAGAAGCTCTTGAATTGGCTAAAGAACTTCTCAGATTTGGAAGTGAAGGAAGCAAtgGATCAATTCTCTATGAGATTGAGAGACTTCAAAAGCTTCAAACTCTTGATCTTTCTTACAATTTGTTCACCCTTGGCCTTCCAAATTCTCTAAGGGGAATGAGCTAG 288 0.3507 MVKKQYCNLARRLKLFIPLFDEIRDMNDSIPIDISKAVILFKEALELAKELLRFGSEGSNGSILYEIERLQKLQTLDLSYNLFTLGLPNSLRGMS 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01459 95 Gene3D Ribonuclease Inhibitor 21 95 IPR032675 -
Tsu07g01459 95 PANTHER U BOX DOMAIN-CONTAINING 2 70 - -
Tsu07g01459 95 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 2 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01459 Tsu-Chr7 13128912 13133653 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01459 2 70 U-box Gene Family AT3G46510 46.377 1.39e-12 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01459 - - pvu:PHAVU_011G064700g 87.0409