Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01450 atgagTATTATTTTACATGAAAGTTCTTCTTCTAAGATGAAAGAGATACTCATAAAAGAACTTATTCAGGGTAAAGAATATGCTACTCAACTCAAATTTATGTTTGAGAATCATGTTGATCACTCTAATGGGTCTGTTTCTGTTAAGGAATTAGTTAGCAATGTGTTAAGAACTTTCTCTGAAACTATTTCTGTGATGACTTCTTCTGAAGCTTGTAATTTTGATGAAGTTGCTCAGAATCATCTTGTGAACAATTCAGGGGAAGAAGGTTCATTAGTTGCAGCTTCTTGTAATGATGATGTTAAATCTGAAGATTCAAGTGAGAGTAAGAAGAGATTGTTACCTACTACAAAGGATCGAAGAGGTTCTTACAAAAGAagGAAGACTGATGAGACAAGGACCATAGTCTCTAAAACCATTGGGGACAATCATTCTTGGAGAAAGTACGGACAGAAGGAAATCCTTAATTCTCAATTCCCTAGGAGTTACTTCAGGTGTACTAGAAAGCATGATCAAGGTTGCAAAGCAACCAAACAAGTACAATTGATAGAAGAAAATCCAGAAATGTACCAAATTACATACATCGGCTTTCACACTTGCAAAGCCTCTCTACAGACTCCGCAAATGGTCGCATTTTCTGCCGATACTAATTGGGACTCATTTGCTGTGAATCATCATCCTCACTCAAAGGAAATTGTAGTACATCAGGATTCCCCTATTATTAGCTCAGAAAGGCCAATTGTGAAACAAGAATATCCGAACAACGACGACAATACTACTCCTCAGAGGAGTGATCTTACAGATAACTTATTGGAAGATAATAACTTGTGGTCTGATTTTAAGGATTTTGAACTCTCCAAACCTGCTACATTAAGCTTTAATAACGTGGCGCCGTCTGATAATGCAGATAATGTGTATTCATGTACTGAATCTCAAAATCTTGAAATCGATTTTGGGTTGTTTTCGGAATTCAGtaatgatttagtatattttgatGAAAGTCATTTACTTTAA 1014 0.3511 MSIILHESSSSKMKEILIKELIQGKEYATQLKFMFENHVDHSNGSVSVKELVSNVLRTFSETISVMTSSEACNFDEVAQNHLVNNSGEEGSLVAASCNDDVKSEDSSESKKRLLPTTKDRRGSYKRRKTDETRTIVSKTIGDNHSWRKYGQKEILNSQFPRSYFRCTRKHDQGCKATKQVQLIEENPEMYQITYIGFHTCKASLQTPQMVAFSADTNWDSFAVNHHPHSKEIVVHQDSPIISSERPIVKQEYPNNDDNTTPQRSDLTDNLLEDNNLWSDFKDFELSKPATLSFNNVAPSDNADNVYSCTESQNLEIDFGLFSEFSNDLVYFDESHLL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01450 337 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 6 321 IPR044810 GO:0003700
Tsu07g01450 337 MobiDBLite consensus disorder prediction 101 131 - -
Tsu07g01450 337 MobiDBLite consensus disorder prediction 98 131 - -
Tsu07g01450 337 SMART WRKY_cls 140 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g01450 337 SUPERFAMILY WRKY DNA-binding domain 137 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu07g01450 337 Gene3D WRKY domain 127 203 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu07g01450 337 Pfam WRKY DNA -binding domain 142 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g01450 337 ProSiteProfiles WRKY domain profile. 135 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g01450 337 PANTHER WRKY DNA-BINDING TRANSCRIPTION FACTOR 70 6 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01450 Tsu-Chr7 13014689 13017264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01450 17 208 WRKY Transcription Factor Family AT3G56400 46.354 3.23e-49 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu07g01450 WRKY 1.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01450 - - gmx:100170683 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01450 07 13014689 13017264 Tsu05g02639 05 36293788 36297799 ECH
Tsu07g01450 07 13014689 13017264 Tsu07g01450 07 13014689 13017264 ECH