Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01449 atggctTCTGGTTCAACTTCTTCAAATTGGGTTATGGAAAGTGGTGACATTCCTCATGTTTTAGCTGTTGATGATTCTCTTGTTGATAGAAAACTTGTTGAGAAACTTCTTAGGAATTCTTGTTGTAAAGTTACAACTGCTGAAAATGGGCCTAAGGCATTGGAGTTATTGGGCTTGTCAAGTGGTGGACAGAACACATTGAATGGGAGGTCCAAAGTAAATTTAGTTATCACAGACTATTGCATGCCAGGAATGACTGGCTATGAGTTACTTAAGAAAATTAAGCAATCATCTGTAATGAAGGAGGTTCCAGTAGTGATCATGTCATCTGAGAACATACCAACAAGGGTCAACAAGTGTCTAGAAGAAGGAGCTCAGATGTTCATACTAAAGCCTCTCAAACAATCTGATGTAAAACAACTGACATGTCAGTTAATGAATTTGGGAAGGTGA 453 0.3775 MASGSTSSNWVMESGDIPHVLAVDDSLVDRKLVEKLLRNSCCKVTTAENGPKALELLGLSSGGQNTLNGRSKVNLVITDYCMPGMTGYELLKKIKQSSVMKEVPVVIMSSENIPTRVNKCLEEGAQMFILKPLKQSDVKQLTCQLMNLGR 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01449 150 SUPERFAMILY CheY-like 18 147 IPR011006 -
Tsu07g01449 150 ProSiteProfiles Response regulatory domain profile. 19 146 IPR001789 GO:0000160
Tsu07g01449 150 Pfam Response regulator receiver domain 20 140 IPR001789 GO:0000160
Tsu07g01449 150 SMART REC_2 18 142 IPR001789 GO:0000160
Tsu07g01449 150 CDD REC_typeA_ARR 20 141 - -
Tsu07g01449 150 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR17-LIKE 7 148 - -
Tsu07g01449 150 Gene3D - 19 150 - -
Tsu07g01449 150 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 148 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01449 Tsu-Chr7 12984194 12985894 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01449 2 147 Response Regulator Gene Family AT3G56380 66.216 2.18e-60 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tsu07g01449 Response_reg 3.5e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01449 K14492 - gmx:100778707 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01449 07 12984194 12985894 Tsu07g01449 07 12984194 12985894 ECH
Tsu05g02563 05 34899152 34900152 Tsu07g01449 07 12984194 12985894 PCT