Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01446 ATGAGAGTTTTGAGAgtgtgttttgtgtgtttgtgctTGCTGTTTCTGGTGACTGTGACAGCTGTGAATCCTTCTTTAAACGATGACGTTTTGGGGTTGATTGTTTTCAAAGCGGATATACAAGATCCGAAGGGAAAGTTAGCATCTTggaatgaagatgatgaaagtGCTTGTGGTGGAAGTTGGGTTGGAGTGAAATGTAACCCTAGATCCAATAGAGTTGTGGAGGTTAACCTTAATGGGTTTTCTTTATCTGGAAGAATTGGTCGTGGTTTACAACGCTTGCAGTTTCTTCGTAGGCTTTATTTGGCGAATAATAATCTTACTGGGAGTATAACTCCTAATATTGCTACTATTGATAACCTTAGGGTTCTTGATTTGAGCAATAATAATCTTTCAGGGGTTGTTCCTGATGATTTTTTCCGACAATGTGGGTCTATGAGAGTTGTTTCTTTGGCGGGGAACATGTTTTCAGGGAATGTTCCTTCGAGTATAGGTTCATGTTCAGCTATTGCTAGTATTGATTTGTCTATTAACCAGTTTTCTGGTTCTGTTCCTAAGGAGATTTGGACTTTGAGTGGACTTAGGTCTCTTGATTTGTCTGATAATTTGTTGGAAGGTGAGATTCCTGAAGGAGTTGAGGCGTTGAAGAATTTGCGGAGCATTAACTTGGCGAGAAATAGCTTTTCTGGGAAGATACCAGATGGGTTTGGAAGTTGTTTGCTTTTGAGGTCTATTGATTTTGGTGATAATTCTTTCTCTGGTAACATACCTAATGATTTGAAGGATTTGGTGTTGTGTGGTTACTTCAGTTTGGGTGGAAATGCTTTCTCAGGAGATGTTCCGGCATGGATTGGAGAGatgaaaggtcttcagacatTGGATCTTTCTCGGAATAGATTTTCTGGTTTGGTGCCAAACACTTTAGGAAATCTTTGGTCATTGAAAACATTGAATCTTTCTGGAAATGGTTTCACTGGTAATCTTCCCGAGTCTATGGCGAATTGCACAAACCTCTTGGCCTTGGATGTTAGCCTAAATTCATTGTCCGGAGATCTTCCATCGTGGATTTTCAAGTCGGATTTGGAGAAGGTTTTGGTAGGTGAAAACAAAATGAGTGGTAGGATGAAAAGCTCCTTGAATGAAGTTGCTGTTCAGAGTCTTCAAGTGTTGGATTTATCTCACAATGCATTTTCTGGTGAAATCACTTCTGCTGTTTCGGGTTTAAGCAGCTTGCAGGCTTTGAACCTATCATATAACTCTCTGAGTGGCCACATTCCATCTGCAATTGGTGGTTTGAAAACATGTTCTAGTCTTGATTTGAGTAATAATAAGCTCAATGGAAGTATACCTTTAGAAATTGGCGAAGCTGTTTCCTTGAAAGAGCTGATTTTGGAAAACAACTTCCTTATTGGGAAAATTCCAATCTCAATTGAGAACTGCTCTTCATTAACAACATTGATTCTGTCGAAGAACAAGCTGAGTGGAACGATACCTGCAGCAGTTGCAAAACTCACCAACCTGAAAACTGTGGACATATCATTCAACAACCTCACTGGAAACCTTCCCAAGCAATTGTCCAACCTTCCCAATCTCGTGACCTTCAATTTATCTCACAACAACCTTGAGGGTGAACTACCTGCTGGTGGTTTCTTCAACACCATTTCGCCTTCATCTGTTTCTGGCAATCCATTTATTTGTGGCTCTGTTGTGAACAAAAAGTGCCCTGTTAAACTCCCGAAGCCTATTGTTCTGAATCCCAACTTTTCTTCCCCTGACACTGACCCTGGTTCGCCTATTCCAACATTAGGTCATAAAAGAAATATCCTCAGCATTTCAGCACTCATTGCCATCGGTGCAGCTGCTTTCATTGTAATTGGTGTCATTGGGATAACTGTTCTCAACCTCCGTGTTCGGTCCACTGCATCTCGATCTCCAGCTGCCCTTGCTTTTTCTGCAGGGGATGATTTCAGTCGATCGCCAACAACAGATGCCAACTCCGGCAAGCTTGTTATGTTTTCAGGTGAACCCGATTTCAGCTCTGGAGCGCACGCTTTGCTTAACAAGGATTGCGAGCTTGGGCGTGGAGGTTTCGGAGCTGTGTACCAAACAGTTCTTGGAGACGGGCGTTCGGTTGCTATAAAGAAGCTCACCGTGTCAAGCCTCGTCAAGTCTCAAGAAGATTTTGAGAGGGAAGTGAAGAAATTAGGAAAAATCAGACACCAAAACCTCGTCGAACTCGAAGGCTATTATTGGACTTCATCGCTGCAACTCCTCATATACGAGTTTGTCTCACGTGGTAGCCTTTACAAGCATCTCCACGAAGGATCAGGCGAAAACTTCCTTTCGTGGAACGAGAGGTTCAATGTCATTCTCGGAACCGCAAAGGCCTTATCTCACTTGCACCACTCCAACATCATTCACTACAACATCAAGTCAACAAACGTCCTTATCGATGGCTACGGTGAACCTAAAGTAGGGGATTACGGCCTAGCAAGACTGCTACCAATGCTTGACCGCTACGTCTTGAGCAGCAAAATTCAAAGCGCACTCGGCTACATGGCACCAGAATTTGCCTGCAAAACAGTGAAAATCACCGAGAAATGTGATGTTTATGGAttcggagttttggttttggagATTGTGACAGGTAAGAGGCCAGTAGAGTACATGGAGGATGACGTGGTTGTACTTTGTGACATGGTTAGAGGAGCATTGGATGAAGGGAGGGTAGAGGAATGCATTGATGAGAGGCTTCAAGGGAAGTTTCCAGTAGAGGAAGTGATTCCAGTGATTAAGCTTGGTTTGGTATGTACTTCACAAGTACCATCTAATAGGCCAGAAATGGGAGAGGTAGTTACCATATTGGAACTTATAAGATGCCCTTCAGGCTCAGATGGACAAGAAGAGTTATTGGGATGA 2922 0.4158 MRVLRVCFVCLCLLFLVTVTAVNPSLNDDVLGLIVFKADIQDPKGKLASWNEDDESACGGSWVGVKCNPRSNRVVEVNLNGFSLSGRIGRGLQRLQFLRRLYLANNNLTGSITPNIATIDNLRVLDLSNNNLSGVVPDDFFRQCGSMRVVSLAGNMFSGNVPSSIGSCSAIASIDLSINQFSGSVPKEIWTLSGLRSLDLSDNLLEGEIPEGVEALKNLRSINLARNSFSGKIPDGFGSCLLLRSIDFGDNSFSGNIPNDLKDLVLCGYFSLGGNAFSGDVPAWIGEMKGLQTLDLSRNRFSGLVPNTLGNLWSLKTLNLSGNGFTGNLPESMANCTNLLALDVSLNSLSGDLPSWIFKSDLEKVLVGENKMSGRMKSSLNEVAVQSLQVLDLSHNAFSGEITSAVSGLSSLQALNLSYNSLSGHIPSAIGGLKTCSSLDLSNNKLNGSIPLEIGEAVSLKELILENNFLIGKIPISIENCSSLTTLILSKNKLSGTIPAAVAKLTNLKTVDISFNNLTGNLPKQLSNLPNLVTFNLSHNNLEGELPAGGFFNTISPSSVSGNPFICGSVVNKKCPVKLPKPIVLNPNFSSPDTDPGSPIPTLGHKRNILSISALIAIGAAAFIVIGVIGITVLNLRVRSTASRSPAALAFSAGDDFSRSPTTDANSGKLVMFSGEPDFSSGAHALLNKDCELGRGGFGAVYQTVLGDGRSVAIKKLTVSSLVKSQEDFEREVKKLGKIRHQNLVELEGYYWTSSLQLLIYEFVSRGSLYKHLHEGSGENFLSWNERFNVILGTAKALSHLHHSNIIHYNIKSTNVLIDGYGEPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACKTVKITEKCDVYGFGVLVLEIVTGKRPVEYMEDDVVVLCDMVRGALDEGRVEECIDERLQGKFPVEEVIPVIKLGLVCTSQVPSNRPEMGEVVTILELIRCPSGSDGQEELLG 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01446 973 Gene3D Transferase(Phosphotransferase) domain 1 764 967 - -
Tsu07g01446 973 Gene3D Phosphorylase Kinase; domain 1 681 763 - -
Tsu07g01446 973 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 1 961 - -
Tsu07g01446 973 SUPERFAMILY Protein kinase-like (PK-like) 690 961 IPR011009 -
Tsu07g01446 973 Pfam Leucine Rich Repeat 218 240 IPR001611 GO:0005515
Tsu07g01446 973 Pfam Leucine Rich Repeat 121 140 IPR001611 GO:0005515
Tsu07g01446 973 Pfam Leucine Rich Repeat 459 481 IPR001611 GO:0005515
Tsu07g01446 973 Pfam Leucine rich repeat N-terminal domain 27 68 IPR013210 -
Tsu07g01446 973 SMART LRR_sd22_2 192 215 - -
Tsu07g01446 973 SMART LRR_sd22_2 385 411 - -
Tsu07g01446 973 SMART LRR_sd22_2 119 140 - -
Tsu07g01446 973 SMART LRR_sd22_2 505 531 - -
Tsu07g01446 973 PRINTS Leucine-rich repeat signature 122 135 - -
Tsu07g01446 973 PRINTS Leucine-rich repeat signature 409 422 - -
Tsu07g01446 973 Pfam Protein tyrosine and serine/threonine kinase 689 954 IPR001245 GO:0004672|GO:0006468
Tsu07g01446 973 SMART LRR_typ_2 216 240 IPR003591 -
Tsu07g01446 973 SMART LRR_typ_2 312 336 IPR003591 -
Tsu07g01446 973 SMART LRR_typ_2 505 528 IPR003591 -
Tsu07g01446 973 SMART LRR_typ_2 192 215 IPR003591 -
Tsu07g01446 973 SMART LRR_typ_2 119 142 IPR003591 -
Tsu07g01446 973 SMART LRR_typ_2 529 553 IPR003591 -
Tsu07g01446 973 SMART LRR_typ_2 385 408 IPR003591 -
Tsu07g01446 973 SMART LRR_typ_2 409 433 IPR003591 -
Tsu07g01446 973 SMART LRR_typ_2 95 118 IPR003591 -
Tsu07g01446 973 SMART LRR_typ_2 288 311 IPR003591 -
Tsu07g01446 973 SUPERFAMILY RNI-like 77 374 - -
Tsu07g01446 973 Pfam Leucine rich repeat 271 324 IPR001611 GO:0005515
Tsu07g01446 973 Pfam Leucine rich repeat 387 446 IPR001611 GO:0005515
Tsu07g01446 973 Pfam Leucine rich repeat 483 542 IPR001611 GO:0005515
Tsu07g01446 973 Gene3D Ribonuclease Inhibitor 287 578 IPR032675 -
Tsu07g01446 973 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE IRK-RELATED 1 961 - -
Tsu07g01446 973 SUPERFAMILY L domain-like 271 559 - -
Tsu07g01446 973 ProSiteProfiles Leucine-rich repeat profile. 121 142 IPR001611 GO:0005515
Tsu07g01446 973 CDD STKc_IRAK 693 959 - -
Tsu07g01446 973 Gene3D Ribonuclease Inhibitor 27 183 IPR032675 -
Tsu07g01446 973 ProSitePatterns Protein kinases ATP-binding region signature. 693 716 IPR017441 GO:0005524
Tsu07g01446 973 ProSiteProfiles Protein kinase domain profile. 687 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01446 973 Gene3D Ribonuclease Inhibitor 184 284 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01446 Tsu-Chr7 12938549 12942263 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01446 8 968 Receptor kinase-like Gene Family AT3G56370 67.635 0.0 1257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Tsu07g01446 PK_Tyr_Ser-Thr 3.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01446 - - mtr:MTR_3g093930 1697.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01446 07 12938549 12942263 Tsu07g01446 07 12938549 12942263 ECH