Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01441 ATGGCTAGCATCAACCAAGAACAACTCAAAAACGAGAATGTCAATTTGGAACAAATTCCATTGAATGAAGTGTTTGAACACTTGAAATGTTCAAGTGAAGGTCTCACTTCCGAGGAAGGAGCCAACCGGCTCCAATCATTTGGACCTAACAAGCTCGAAGAGATTAAGGATAgcaaatttttgaaatttttgggttttatgtGGAACCCTTTGTCATGGGTTATGGAAGTTGCTGCCATCATGGCGATTGCTTTGGTGAATGGTGGAGGAAAGCCTCCGGATTGGCAAGATTTTGTTGGAGTCGTTGTTCTCTTGGTGGCTAACTCGACAATCAGTTTCATTGAAGAGAACAATGCTGGCAATGCTGCGGCCGCTCTTATGGCTGGATTAGCTCCAAAGACAAAGGTGCTAAGAGACGGAAAATGGAGTGAGCAAGATGCTGCAATTTTAGTACCAGGAGACATAATCAGCATCAAGTTAGGAGACATTATTCCTGCCGATGCACGACTTCTAGAGGGTGATCCTTTAAGCGTTGATCAATCTGCTTTAACAGGAGAATCACTTCCTGTGACAAAGTGTGCAACTCAAGAAGTGTTTTCAGGATCAACTGTTAAGAAGGGTGAGATCAAAGCAGTTGTGTATGCTACTGGTGTGCACACATTTTTCGGCAAAGCAGCTCATTTGGTGGATAGTACAAACCAAGTTGGACATTTTCAGAAAGTGCTAACAGCTATTGGTAACTTCTGCATTTGTTCAATTGCTGTTGGAATAATCGTTGAGCTTATTGTGATGTATCCGATTCAACACCGGAAGTATAGAGATGGAATTGACAATCTTTTGGTTCTATTGATTGGTGGAATTCCAATTGCAATGCCAACTGTTTTATCTGTTACTATGGCTATTGGTTCTCATAGGCTTTCGCAACAAGGCGCAATCACAAAAAGAATGACTGCTATTGAAGAAATGGCTGGAATGGATGTTCTTTGCAGTGATAAAACAGGAACTCTCACTCTGAATAAGCTTAGTGTTGACAAAGACTTGATTGAGGTGTTTTCTAGAGGTCTTGATAAGGACCATGTGATACTTCTAGCTGCAAGAGCGTCTAGGATAGAAAATCAGGATGCTATTGATGCTGCAATTGTTGGAATGCTTCCTGATCCACTAGAGGCTAGAGCTGATATCAATGAGGTACACTTTCTTCCGTTCAATCCAGTAGAAAAGAGGACTGCTCTTACCTATGTTGATTCCGATGGAAATTGGCATAGAGCTAGCAAAGGAGCTCCTGAACAGATATTGAATCTCTGCAACTGCAGAGAGAATGAAACGAGAAAGGCTCATGCAGTCATTGATAGGTTTGCTGAGCGTGGACTTAGATCCTTAGGCGTTGCTTATCAAGAAGTACCCGAAAAATCCAAAGACAGTCCTGGGGCTCCATGGCAATTCATTGGATTATTGCCCTTATTCGATCCCCCAAGGCACGACAGTGCTGAAACCATTAGAAGAGCACTCGGCCTGGGCGTAAATGTTAAAATGATCACCGGGGACCAACTTGCCATCGGAAAGGAAACAGGCAGAAGGCTTGGAATGGGAACGAACATGTATCCATCATCTGCATTGCTTGGAGAAGGTTCTTCTATTTCAGATGTTCCTATTGATGAGTTGATCGAGAAAGCTGATGGATTTGCAGGAGTATTTCCCGAGCACAAATACGAAATAGTAAGAAGGCTTCAAGAGAGGAAGCACATATGTGGCATGACAGGTGATGGTGTGAACGACGCACCAGCATTGAAGAGAGCTGATATCGGAATTGCTGTTGCTGATGCTACAGATGCTGCTAGAAGTGCTGCAGATATTGTTCTCACTGAACCTGGTTTGAGTGTAATTATCAGTGCTGTGCTCACCAGCAGGGCCATTTTCCAAAGAATGAAAAACTATACTATTTATGCCGTGTCCATCACAATCAGAATTGTGTTTGGTTTCATGTTCATTGCTTTGATCTGGAAATTTGATTTTGCACCCTTCATGGTTCTGATAATTGCAATACTGAATGATGGTACCATAATGACAATATCTAAGGATAGAGTGAAACCATCTCCACTACCTGACAGTTGGAAACTGAAGGAGATATTCGCTACCGGTATTGTGCTCGGCAGTTACATGGCACTGATGACAGTCGTATTTTTCTGGGCGGCTCATGATACCAACTTTTTCTCGGACAAGTTTGGTGTGAGATCTTTGAGAAATAATCCTAGTGAAATGATGGCAGCTTTGTACTTGCAAGTTAGTATCATAAGCCAAGCACTAATTTTTGTGACTAGGTCTCGCAATTGGTCTTTCTTCGAAAGACCTGGCCTTTTACTACTCGGTGCTTTTTTCATTGCTCAACTGATTGCAACACTTATAGCAGTGTATGCTAATTGGGAATTTGCCAGAATTAAGGGAATGGGATGGGGTTGGGCTGGTGTTATCTGGTTGTACAGTTTGGTAACTTATATCCCTCTTGATTTACTCAAAATCGCAATCCGCTATATTCTGAGCGGAAAGGCGTGGAACAATCTTTTGGAAAATAAGACCGCATTTACTACGAAGAAAGATTATGGCAAAGAAGAGAGGGAAGCGAAATGGGCGATAGCGCAGAGATCACTTCATGCGCACAAATCACTTCACGGTGATCAGGCTTCTACCTCGAACAACATTTTCAATGAAAGCAGCAGTTACCGCGAACTTTCAGAAATAGCCGAACAGGCCATGAGACGTGCAGAAGTTGCACGGCTCATGGAGAAGAACACCCTGAAAGGGCGTGTTGAGTCGGTCTGGTTTGTCTCACCACTTTCGCATCTCTGCACGACGTCTCCACCAAAGACTATTGAGACTGGTAATGGTAAGACTATTACTCAGGCCAAATTTGGAATACGACGCGCAAGTTGGAATCTATTTGAACGGCGAACCTACAGAGATATAGGAGAGTCCCAAATCAAGGGAATGATATGGTGTTTCATTGTTTACGGCATCAAACACATCGAGGGAAGGTCATGGCCTGCTCCCATCACAGTTCCAGATGAGTCTACTATCAAAGCAATGGAATATGTTTACAAGGAAATTTATGCTCTTAATGGAATTACTGATCTCAATTTTCCTCAACATTACCCTGTTTCTAGGCTTTTGGCTTGTTCAGCAGCGGATGCAGCTCACATTCCCCCAATTGATTCGATTTCTGTGGCATAG 3225 0.4257 MASINQEQLKNENVNLEQIPLNEVFEHLKCSSEGLTSEEGANRLQSFGPNKLEEIKDSKFLKFLGFMWNPLSWVMEVAAIMAIALVNGGGKPPDWQDFVGVVVLLVANSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLSVDQSALTGESLPVTKCATQEVFSGSTVKKGEIKAVVYATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIIVELIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKDLIEVFSRGLDKDHVILLAARASRIENQDAIDAAIVGMLPDPLEARADINEVHFLPFNPVEKRTALTYVDSDGNWHRASKGAPEQILNLCNCRENETRKAHAVIDRFAERGLRSLGVAYQEVPEKSKDSPGAPWQFIGLLPLFDPPRHDSAETIRRALGLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEGSSISDVPIDELIEKADGFAGVFPEHKYEIVRRLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSAADIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGSYMALMTVVFFWAAHDTNFFSDKFGVRSLRNNPSEMMAALYLQVSIISQALIFVTRSRNWSFFERPGLLLLGAFFIAQLIATLIAVYANWEFARIKGMGWGWAGVIWLYSLVTYIPLDLLKIAIRYILSGKAWNNLLENKTAFTTKKDYGKEEREAKWAIAQRSLHAHKSLHGDQASTSNNIFNESSSYRELSEIAEQAMRRAEVARLMEKNTLKGRVESVWFVSPLSHLCTTSPPKTIETGNGKTITQAKFGIRRASWNLFERRTYRDIGESQIKGMIWCFIVYGIKHIEGRSWPAPITVPDESTIKAMEYVYKEIYALNGITDLNFPQHYPVSRLLACSAADAAHIPPIDSISVA 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01441 1074 Gene3D - 132 216 - -
Tsu07g01441 1074 PANTHER PLASMA MEMBRANE ATPASE 1 936 - -
Tsu07g01441 1074 Pfam E1-E2 ATPase 131 308 - -
Tsu07g01441 1074 PRINTS H+-transporting ATPase (proton pump) signature 558 574 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tsu07g01441 1074 PRINTS H+-transporting ATPase (proton pump) signature 758 779 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tsu07g01441 1074 PRINTS H+-transporting ATPase (proton pump) signature 445 463 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tsu07g01441 1074 PRINTS H+-transporting ATPase (proton pump) signature 586 602 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tsu07g01441 1074 PRINTS H+-transporting ATPase (proton pump) signature 617 642 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tsu07g01441 1074 SFLD p-type atpase 311 637 IPR044492 -
Tsu07g01441 1074 SFLD C1.7: P-type atpase like 311 637 - -
Tsu07g01441 1074 ProSitePatterns E1-E2 ATPases phosphorylation site. 331 337 IPR018303 -
Tsu07g01441 1074 Gene3D - 341 488 IPR023299 GO:0000166
Tsu07g01441 1074 SUPERFAMILY HAD-like 325 633 IPR036412 -
Tsu07g01441 1074 Pfam haloacid dehalogenase-like hydrolase 325 600 - -
Tsu07g01441 1074 Gene3D - 94 813 - -
Tsu07g01441 1074 SMART Cation_ATPase_N_a_2 15 87 IPR004014 -
Tsu07g01441 1074 Gene3D - 326 623 IPR023214 -
Tsu07g01441 1074 SUPERFAMILY Calcium ATPase, transduction domain A 132 229 IPR008250 -
Tsu07g01441 1074 Pfam Cation transporter/ATPase, N-terminus 18 81 IPR004014 -
Tsu07g01441 1074 PANTHER CALCIUM-TRANSPORTING ATPASE 1 936 - -
Tsu07g01441 1074 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 845 IPR023298 -
Tsu07g01441 1074 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 34 804 IPR006534 GO:0008553|GO:0016021|GO:0120029
Tsu07g01441 1074 Gene3D - 904 944 - -
Tsu07g01441 1074 CDD P-type_ATPase_H 34 839 IPR006534 GO:0008553|GO:0016021|GO:0120029
Tsu07g01441 1074 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 102 351 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tsu07g01441 1074 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 561 676 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tsu07g01441 1074 PRINTS P-type cation-transporting ATPase superfamily signature 179 193 - -
Tsu07g01441 1074 PRINTS P-type cation-transporting ATPase superfamily signature 586 605 - -
Tsu07g01441 1074 PRINTS P-type cation-transporting ATPase superfamily signature 505 515 - -
Tsu07g01441 1074 PRINTS P-type cation-transporting ATPase superfamily signature 609 621 - -
Tsu07g01441 1074 PRINTS P-type cation-transporting ATPase superfamily signature 483 494 - -
Tsu07g01441 1074 PRINTS P-type cation-transporting ATPase superfamily signature 329 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01441 Tsu-Chr7 12884835 12895172 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01441 2 938 Primary Pumps ATPases AT2G07560 80.277 0.0 1540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01441 K01535 - gmx:100791692 1597.79