Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01436 ATGTCGTACCCGTTCCACCGTCGATCTCAATCAGAGGTACATTTCCGAGTCCCCGACGATTTCGACTTAGAAATGGATCCCTTCGACTTCGACGCTTCTCCGATCCAATTCCAagatccaccaccaccacaacacGACGATCTTCTCTCTTCTTACATTGATTCCGACAATTCCGGATCCAAACTCAACTCTCCTACCGCCAATAATGCAGATACCGCTAGACCTAGTCACCGCCGAAGCAATTCCGCCGATACTTCTTCTTCCTTGTTATCAGAAGGAATCGAATCTAAGAAAGCTATGTCTCCTGATAAACTTGCTCAATTGTGGACCGTTGATCCCAAACGCGCCAAgagGATTCTGGCGAATCGTCAATCTGCAGCGCGGTCGAAAGAGAGGAAAGCTTGTTATGTGGTTGAGCTTGAAAGAAAAATTCATACTCTTCAAACTGAAGCAACAACTCTTTCTGCTCAATTAAATCTTTTTCAGCGAGATACAAGTGGTCTGTCTAGTGAAAATACTGAGTTGAAGCTTCGGTTACAAGCAATGGAGCAACAAGCTAAGTTATGTGATGCTCTAAATGACGCATTGAAGAACGAAGTTGATAGGCTCAAGCTTGCTACTGGAGAGGTAACAACCCATGCTGATGCCTATGGTTTGGGAATGCATCAACTTTCATATTCTCAACCTTCATCCTTCCTGCACCAACCACAACATGCTCTGAGTCCGAACGAGCTTCAGGCCATGCAAATGCAGCAGTTTCATTCAGTCTCATCTAACGCATCCACTCCCCACCATCCTCAGTTTGATCTACCCACTCAATATGATTTGTCAGAAATGTTGTCAAGTGATTCTATCGGCCAGTTTCAGGGGCTGGACATTGGCCACAAGATTAACATGAGTGAGACCCAAAgACTAGCAGGTCGTTGTACCAGTTCTCATTTCCACCTTGTTGcacaaaataaccttttgtcaGCAATTTCAGTTGCTGTAGACTGTATAGTTCATACATGTGGACATGGTATGCCATGGACACAGACCATTGAGTTCATTTTTTGTGTATGCGAAATGTAG 1071 0.4258 MSYPFHRRSQSEVHFRVPDDFDLEMDPFDFDASPIQFQDPPPPQHDDLLSSYIDSDNSGSKLNSPTANNADTARPSHRRSNSADTSSSLLSEGIESKKAMSPDKLAQLWTVDPKRAKRILANRQSAARSKERKACYVVELERKIHTLQTEATTLSAQLNLFQRDTSGLSSENTELKLRLQAMEQQAKLCDALNDALKNEVDRLKLATGEVTTHADAYGLGMHQLSYSQPSSFLHQPQHALSPNELQAMQMQQFHSVSSNASTPHHPQFDLPTQYDLSEMLSSDSIGQFQGLDIGHKINMSETQRLAGRCTSSHFHLVAQNNLLSAISVAVDCIVHTCGHGMPWTQTIEFIFCVCEM 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01436 356 Gene3D - 113 186 - -
Tsu07g01436 356 MobiDBLite consensus disorder prediction 26 89 - -
Tsu07g01436 356 CDD bZIP_plant_RF2 115 164 IPR044759 GO:0003700|GO:0006355
Tsu07g01436 356 Pfam bZIP transcription factor 114 172 IPR004827 GO:0003700|GO:0006355
Tsu07g01436 356 MobiDBLite consensus disorder prediction 50 89 - -
Tsu07g01436 356 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 112 175 IPR004827 GO:0003700|GO:0006355
Tsu07g01436 356 PANTHER BZIP TRANSCRIPTION FACTOR 18 3 300 - -
Tsu07g01436 356 Coils Coil 179 199 - -
Tsu07g01436 356 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 3 300 - -
Tsu07g01436 356 SMART brlzneu 110 174 IPR004827 GO:0003700|GO:0006355
Tsu07g01436 356 SUPERFAMILY Leucine zipper domain 114 168 IPR046347 GO:0003700|GO:0006355
Tsu07g01436 356 Coils Coil 137 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01436 Tsu-Chr7 12865472 12869440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01436 4 293 bZIP Transcription Factor Family AT2G40620 51.368 3.24e-86 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu07g01436 bZIP_1 8.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01436 - - gmx:100807712 337.035