Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01421 ATGGAAACCGCAATCCTCAAATGCAACATTGATACAATCTTGTTCACCATGAGCAACCAAGTTAGTATAAGAGCTTGCATTAGAGATAAAAAGAGACATTTTGTATCAACAAGATATATTGATGTTATAAATGACACCGGAGGAAGGAGAAGCATGAAGACTTCAACAAGTAATGATGTGAATGAAGTTGCTAGAATATCACAATGTGATCTTCGAGATGTACGATTGCCGCCGAACAACCTCCCAGTTTTGGCCACAATGaCATTCAAGCGTAGGAATGGAGGTCGCAACAAGCATGGCCGTGGCCATGTCAAATTCATCCGTTGCTCTAACTGCGGAAAATGCTGCCCTAAGGATAAGGCTATTAAGCGTTTTCTTGTGAGGAACATTGTTGAACAGGCTGCTGTTAGAGATGTTCAGGAAGCTTGTGTTTATGATCAATACACTCTTCCTAAGCTGTATGTGAAGATGCAGTACTGTGTTTCCTGTGCTATTCACTCTCATGTTGTGAGGGTCAGATCTCGCACTGATAGGAGGAAGCGTGAGCCTCCACAGCGTTTCATCAGGCGCAGGGATGATGCACCAAGGCCTGGACAGCCCGGCCAAGCTCCCCGCCCTGCTGGACCTGGAGCTCCCCCAGTCCGTAACTAG 651 0.4593 METAILKCNIDTILFTMSNQVSIRACIRDKKRHFVSTRYIDVINDTGGRRSMKTSTSNDVNEVARISQCDLRDVRLPPNNLPVLATMTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKREPPQRFIRRRDDAPRPGQPGQAPRPAGPGAPPVRN 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01421 216 ProSitePatterns Ribosomal protein S26e signature. 159 166 IPR000892 GO:0003735|GO:0005840|GO:0006412
Tsu07g01421 216 MobiDBLite consensus disorder prediction 199 216 - -
Tsu07g01421 216 PANTHER 40S RIBOSOMAL PROTEIN S26 87 215 - -
Tsu07g01421 216 PANTHER 40S RIBOSOMAL PROTEIN S26 87 215 IPR000892 GO:0003735|GO:0005840|GO:0006412
Tsu07g01421 216 MobiDBLite consensus disorder prediction 176 196 - -
Tsu07g01421 216 Pfam Ribosomal protein S26e 87 192 IPR000892 GO:0003735|GO:0005840|GO:0006412
Tsu07g01421 216 MobiDBLite consensus disorder prediction 173 216 - -
Tsu07g01421 216 Gene3D Ribosomal protein S26e 87 200 IPR038551 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01421 Tsu-Chr7 12714813 12717203 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01421 87 202 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 83.621 1.49e-68 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01421 K02976 - gmx:100784958 210.305