Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01414 ATGGAAAGTGTTAGTAACATTGGTTTCTCTTCAACATTCAGAGTTTCTTTACCTTCAAACCAGAGGAAACATAAATCTCCATGCACTTTTATGGTTCCTTTCAACTACTCTATTAGGAAGAACAAAATCTGTTGTAAACTTTCAGAAAGTGGGATTGAAGAGAACCCTACTACCAATAGGGTCTCTAAATCTAAAGATATGATGGAAGAATACAATATtgctatgaagaagatgatgaggaACCCTTATGAGTATCATCATGATCTTGGTATGAATTATAACGTTATAACTGACAATTTGATTGTCGGATCCCAACCACAGAAACCTGAAGATGTAGATCACCTTAAGAAGGAAGAAGGTGTAGCATACATTCTAAACTTGCAACAGGATAAGGATGCTGAGTTTTGGGGTATAGACTTACAGTCAATAGTAAGAAGGAGTCGCGAACTTGAAATTAGACACATGAGGAGACCGGCAGTAGACTTTGATCCAAACTCGTTGCGAAGTGCGCTACCTAAAGCAGTTTCATCTTTGGAATGGGCGATTTCTGAGGGAAAAGGAAGAGTTTATGTGCATTGTACTGCAGGACTTGGAAGAGCTCCAGCAGTTGCAATTGCTTATTTGTTCTGGTTTTCTGACATGAATCTAAATGCAGCCTATGATCTGCTAACTTCAAAGAGACCTTGTGGACCGAATAAAAAAGCGATACGTGGAGCTACTTATGATTTGGCTAAGAATGATCCATGGAAGGAGCCATTTGAGAGTCTTCCAGACCATGCTTTTGGAGATATAGCAGACTGGGAGAGGAACCTGATTCAAAACCGCGTCCGTGCTCTTCGTGGAACTTGA 849 0.3899 MESVSNIGFSSTFRVSLPSNQRKHKSPCTFMVPFNYSIRKNKICCKLSESGIEENPTTNRVSKSKDMMEEYNIAMKKMMRNPYEYHHDLGMNYNVITDNLIVGSQPQKPEDVDHLKKEEGVAYILNLQQDKDAEFWGIDLQSIVRRSRELEIRHMRRPAVDFDPNSLRSALPKAVSSLEWAISEGKGRVYVHCTAGLGRAPAVAIAYLFWFSDMNLNAAYDLLTSKRPCGPNKKAIRGATYDLAKNDPWKEPFESLPDHAFGDIADWERNLIQNRVRALRGT 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01414 282 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF2, CHLOROPLASTIC 19 282 - -
Tsu07g01414 282 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 169 228 IPR000387 GO:0016311|GO:0016791
Tsu07g01414 282 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 89 234 IPR029021 -
Tsu07g01414 282 SMART dsp_5 92 234 IPR020422 GO:0006470|GO:0008138
Tsu07g01414 282 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 19 282 - -
Tsu07g01414 282 ProSiteProfiles Dual specificity protein phosphatase domain profile. 92 249 IPR020422 GO:0006470|GO:0008138
Tsu07g01414 282 CDD DSP_laforin-like 91 238 IPR045204 GO:0019203|GO:0046838
Tsu07g01414 282 Pfam Dual specificity phosphatase, catalytic domain 113 232 IPR000340 GO:0008138|GO:0016311
Tsu07g01414 282 Gene3D Protein tyrosine phosphatase superfamily 75 282 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01414 Tsu-Chr7 12678946 12681437 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01414 43 282 Protein tyrosine phosphatase (PTP) family AT3G10940 78.423 1.95e-142 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01414 - - gmx:100805592 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01414 07 12678946 12681437 Tsu07g01414 07 12678946 12681437 ECH