Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01412 ATGGCTCCTTCCATGATTAGTTTGGCTTTCTTTGTCCTCTTCATAGTAGGGAGTGCCAATGCACAACTTTCTACAAACTTTTACTCAAGTTCTTGTCCTAAACTCTCTTCCACGGTAAAATCCACAATACAATCCGCCATATCAAAGGAAACCCGAATGGGTGCATCCATCCTTCGTCTGTTCTTTCACGATTGTTTTGTCAATGGATGTGACGGGTCAATTTTACTCGATGACACATCAAGCTTTACTGGAGAGAAGAATGCAAACCCGAATAGAAACTCTGCTCGTGGATTTGAAGTCATTGACAACGTAAAGACAGCAGTAGAGAAAGCATGTCCCGGAGTTGTATCTTGTGCTGACATCCTTGCCATTGCTGCAGCCGACTCTGTTGCAATTCTTGGAGGTCCAACTTGGAATGTAAAACTAGGAAGAAGAGATGCTAAAACAGCTAGTCAATCTGCTGCTAACACTGCTATTCCAGCACCCACTTCCAACCTCAATACACTAACCTCAATGTTTAGTGCTGTTGGTCTTTCTACCAAGGACTTGGTCGCATTGTCAGGAGCTCACACAATTGGACAAGCAAGGTGCACAAATTTTAGAGCACGAATCTATAACGAGACCAACATAGATACTTCATTTGCTaccaaaagaaaatcaaaatgtCCAAAGGCATCTGGGTCAGGGGACAACAATTTGGCACCCCTTGATCTTCAGACTCCATCTTCCTTCGATAATAACTACTTCAAGAACCTTGTTAACAAAAAGGGTCTTCTTCATTCTGATCAACAACTTTTCAATGGAGGTTCCACAAACTCCATAGTGAGTGGCTACAGTACTAATCCAAGCTCGTTTTCTTCTGACTTTGCCGCTGCTATGATCAAGATGGGAGACATTAAACCTCTCACCGGATCCAATGGAGAGATCAGGAAGAATTGTAGAAAAAGAAACTAA 954 0.4172 MAPSMISLAFFVLFIVGSANAQLSTNFYSSSCPKLSSTVKSTIQSAISKETRMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEKNANPNRNSARGFEVIDNVKTAVEKACPGVVSCADILAIAAADSVAILGGPTWNVKLGRRDAKTASQSAANTAIPAPTSNLNTLTSMFSAVGLSTKDLVALSGAHTIGQARCTNFRARIYNETNIDTSFATKRKSKCPKASGSGDNNLAPLDLQTPSSFDNNYFKNLVNKKGLLHSDQQLFNGGSTNSIVSGYSTNPSSFSSDFAAAMIKMGDIKPLTGSNGEIRKNCRKRN 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01412 317 PANTHER PEROXIDASE 72-RELATED 5 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g01412 317 PANTHER PEROXIDASE 5 315 - -
Tsu07g01412 317 CDD secretory_peroxidase 22 315 IPR033905 GO:0004601|GO:0042744
Tsu07g01412 317 Pfam Peroxidase 39 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g01412 317 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Tsu07g01412 317 ProSiteProfiles Plant heme peroxidase family profile. 22 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g01412 317 SUPERFAMILY Heme-dependent peroxidases 22 317 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu07g01412 317 Gene3D Peroxidase, domain 2 160 296 - -
Tsu07g01412 317 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g01412 317 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g01412 317 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g01412 317 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g01412 317 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g01412 317 Gene3D - 26 314 - -
Tsu07g01412 317 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Tsu07g01412 317 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g01412 317 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g01412 317 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g01412 317 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g01412 317 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g01412 317 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g01412 317 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g01412 317 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g01412 317 PRINTS Plant peroxidase signature 291 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01412 Tsu-Chr7 12628207 12629898 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01412 21 317 Peroxidase AT5G05340 78.451 9.56e-178 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01412 K00430 - gmx:100803637 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01412 07 12628207 12629898 Tsu05g03413 05 45445062 45447182 ECH
Tsu03g00794 03 7238206 7240757 Tsu07g01412 07 12628207 12629898 ECH
Tsu07g01412 07 12628207 12629898 Tsu07g01412 07 12628207 12629898 ECH