Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01410 ATGTCCAGAGAAAGGGAGAGATTTGATGAGATAGGGAAGAAGATAAAGAGGGAAGgagatcatcatcatcatcatgtttCAAATAACTCTCATCAGATGGGAAGAAGACATATGTTAGGACCTCCTGGAACCCTAAATACTATAACACCTTGTGCAGCATGTAAGCTTTTAAGAAGAAGATGTGCTCAAGAATGTCCTTTCTCTCCCTATTTCTCTCCTCATGAACCTCAAAAGTTTGCTTCTGTTCACAAAGTTTTTGGTGCCAGTAATGTCTCCAAGATGCTAATGGAGGTAGCAGAGTGTTCAAGAGCAGATGCAGCAAATAGTCTTGTTTATGAAGCAAATGTTAGACTAAGAGATCCAGTTTATGGATGCATGGGTGCAATTTCTACACTACAACAACAGGTTCAATCTTTACAAGCTGAACTCAATGTATTAAGAAGTGAAATACTTAAATACAAATTAAGAGAAGCAGCTAACATCAACATGAATAATATGAATATCAATAATATGCTACAAGCTTCTTCTCATCATCATGTTCCTATGCTCCCTTCTAATAATTCTTCTGTGGCTGTTTCAATTGCTGCTCCACCGCCGCCGCCGCCaccacctcctcctcctcctcttcctcCAACTTctaattcatcttcttccatataCTTTCAAGAGAGGGATCACAACAACTATAGCACAATTTCAAGTGATGATAATATTTCCTATTTTGGTTAA 729 0.3443 MSRERERFDEIGKKIKREGDHHHHHVSNNSHQMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVAECSRADAANSLVYEANVRLRDPVYGCMGAISTLQQQVQSLQAELNVLRSEILKYKLREAANINMNNMNINNMLQASSHHHVPMLPSNNSSVAVSIAAPPPPPPPPPPPPLPPTSNSSSSIYFQERDHNNYSTISSDDNISYFG 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01410 242 MobiDBLite consensus disorder prediction 13 36 - -
Tsu07g01410 242 Pfam Lateral organ boundaries (LOB) domain 50 147 IPR004883 -
Tsu07g01410 242 Coils Coil 129 156 - -
Tsu07g01410 242 MobiDBLite consensus disorder prediction 189 242 - -
Tsu07g01410 242 PANTHER LOB DOMAIN PROTEIN 32 241 - -
Tsu07g01410 242 MobiDBLite consensus disorder prediction 194 213 - -
Tsu07g01410 242 MobiDBLite consensus disorder prediction 13 27 - -
Tsu07g01410 242 ProSiteProfiles LOB domain profile. 49 150 IPR004883 -
Tsu07g01410 242 MobiDBLite consensus disorder prediction 214 242 - -
Tsu07g01410 242 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 32 241 - -
Tsu07g01410 242 Pfam Mitochondrial fission regulator 134 228 IPR007972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01410 Tsu-Chr7 12597581 12599422 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01410 5 167 AS2 family AT2G30340 64.671 2.06e-72 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tsu07g01410 Mito_fiss_reg 5.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01410 - - gmx:100790799 303.138