Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01409 ATGACTCCTCCACCAACCTTCTTCTTTTCCGCGGCGGCGCATTTACTTTTCATTTTACTCACAACTTGCTCCGCTTCTTTACCGGAGCTCCGATCTCTACTCGAATTCAAAAAAGGCATACCCTCAGATCCAGATTACCGAGTTCTTAACTCATGGAGTCTTTCATCCATCAACGACTTCAATCAATGTCCTACTTCATGGCAAGGTATCTTCTGCGACGAAGTTACCGGAAACATCACCGGAATTGTTCTCGACCACTTCAATCTCACCGGAGAATTGAAATTTCAAACTTTGCTTGACCTTAAAATGTTGAAAAATCTTAGTCTCGCTGGTAATCAGTTCACCGGAAGGTTACCTCCTTCATTAGGAACGATAACTTCACTTCAGCATTTGGATCTTTCTAACAACAAATTCATCGGTCCAATTCCGGCTCGGATCAACGATCTTTGGGGTCTCAATTATCTCAATTTATCACACAATGATTTCAAAGGTGGATTTCCAACTGGTCTCAATAATCTTCAACAACTTAGGGTTCTTGATTTGCACTCTAACCAACTCTGGGCTGACATTGGTGAACTGATTTCGACTCTTCACAACGTTGAATTTCTTGATTTAAGTCAAAATCAGTTCTATGGTGGACTTTCACTTACTCTTGAAAATGTTTCATCTTTGGCTAATACTGTTCGGTTTTTGAACCTTAGTCGAAATAAATTGAATGGAGAATTTTTCACAAGTGATTCAATTGCATTGTTTCGTAACTTGGAAGCTTTGGATTTGAGTGATAATTTGATTAGAGGGGAGCTTCCTTCGTTCGGTTCATTGCCTGAACTTCGGGTTCTGATGCTTGCAAGGAATCTCTTATTTGGTGCTGTTCCTGAAGACTTGTTGCTGAGTTCAATGTCCTTGCAAGAATTGGATCTTAGCTCTAATGGCTTTTCTGGCTCAATTGCTGCAGTTAACTCATCCACTTTAAATGTTTTGAATCTTTCGAGGAATAGTTTATCAGGCTCATTGCCAACATCTTTGGGAAGATGTACAGTCATAGATTTCAGTAGGAATATGTTTTCTGGCGACATTTCTGTAATAGATAACTGGGAAGCCACTATGGAGGTTATTGATCTGAGTTCAAACAAGCTGTCAGGATCCTTGCCTTCTATTTTAGGGACATATTCAAAATTGTCTACCCTTGACTTAAGTTTTAATGAACTTAATGGATCCATTCCAGTTGGTTTAGTTACTTCACCATCATTGACCAGACTGAATCTTTCTGGAAATCAATTTACAGGGCCGCTTTTGCTTCATGGTTCAGGGGTAAGTGAATTACTACTTATGCCTCCTGATCAGCCAATGGAATACTTTGACGTATCCAACAACTCTTTAGAAGGTGTCTTGCCTTCTGATATAGGTAGAATGATTAAGCTCAAACAGCTGAATCTGGCAAGGAATGGCTTTTCCGGACAGCTTCCAAATGAATTGAGCAAACTTATTGATTTGGAGTACCTTGATTTGTCTAACAACAAATTTACTGGAAATATTCCCGACAAACTTTCAAATAACTTGACTGTATTTAATGTGTCCAATAATGATCTATCTGGCCCTGTTCCCGAAGATTTGCGGCGGTTTCCTTCTGCATCCTTTTACCCTGGAAATAAAAAGCTAAAGTTACCGAATAATTCTCCTGAACGTTCTGCTGCACTGCCAGATAATCCGGATGAAGGTAAACATCATAGTTCAAAGAGTAATATCAGGATAGCAATTATCCTTGCTTCTGTGGGGGCTACTGTGatgattgtttttgttttattggcTTATCATCGATCACAAGCGAAAGAATTTCGTGGGAGAAGTGATTTTGCTGGACCAGCTACCGGAAGAGATGCCAAGTTAGGAGGACTTTCAAGGCCTTCCCTCTTCAAGTTCCATTCAAATGCTCAACCCTCATCATCTTCACTGAGCTTTTCAAATGATCACTTATTGACATCCAATTCAAGGTCACTTTCTGGACAACAGTCAGAGTTTATAACTGAAATTTCTGAGCACTGCTTACCAGAGGGAGTGGTAGCAACCAGTTCAGCACCTCCTAATTTGATGGATAACCCTCCCATGTCATCTGGAAGGAAGTCCTCTCCTGGTTCCCCATTGTCGTCCTCACCACGCTTTATAGAGGCTTGTGAAAAGCCTGCAATGTTGGACGTTTACTCACCAGATCGACTGGCCGGGGAATTGTTTTTCCTGGATTCTTCACTAGCATTCACTGCAGAGGAATTATCTCGAGCTCCGGCTGAAGTTCTTGGCAGAAGTAGCCACGGCACTCTGTACAAAGCTACTCTGGACAATGGTCATATGTTAACTGTAAAATGGTTAAGGGTGGGACTGGTCAAACTTAAAAAGGAATTTGCTAGAGAAGTTAAAAAGATCGGTTCTATGAGGCATCCAAACATTGTCCCATTACTAGCATACTATTGGGGGCCTAGGGAACAGGAGAGGCTTCTTTTAGCTGACTACATTCACGGAGACAACTTGGCCCTCCATCTCTATGAGACCACACCCCGGAGGTACTCGCCATTGTCGTTCGGCCAGAGAATAAGAGTTGCAGTTGAAGTTGCAAGATGTCTTTTATACCTACATGATCGAGGGCTTCCCCATGGAAATCTGAAGCCGACAAATATTCTGTTAGCAGGCCCTGAATACAGTGTTTGTCTTACTGACTACGGTTTGCATCGGCTCATGACACCAGCTGGAGTTGCAGAGCAGATGCTAAATCTAGGAGCACTCGGATACCGCGCTCCAGAACTTGCTTCTGCTTCCAAACCACTCCCATCCTTTAAGGCCGATGTGTATGCACTTGGGGTGATCCTAATGGAATTATTAACAAGAAAAAGTGCAGGCGACATAATATCTGGACAATCAGGTGCTGTCGATCTTACAGATTGGGTTAGGCTGTGTGAAAGAGAAGGAAGGGTAATGGACTGTATAGACAGAGACATTGCAGGTGGCGAAGAATCCTCTAAAGAGATGGACCAACTGCTTGCAACATCTCTCAGGTGTATTCTCCCTGTAAATGAAAGGCCCAACATCAGACAAGTTTTTGAAGATCTCTGTTCTATATCATCAGCTTGA 3120 0.4183 MTPPPTFFFSAAAHLLFILLTTCSASLPELRSLLEFKKGIPSDPDYRVLNSWSLSSINDFNQCPTSWQGIFCDEVTGNITGIVLDHFNLTGELKFQTLLDLKMLKNLSLAGNQFTGRLPPSLGTITSLQHLDLSNNKFIGPIPARINDLWGLNYLNLSHNDFKGGFPTGLNNLQQLRVLDLHSNQLWADIGELISTLHNVEFLDLSQNQFYGGLSLTLENVSSLANTVRFLNLSRNKLNGEFFTSDSIALFRNLEALDLSDNLIRGELPSFGSLPELRVLMLARNLLFGAVPEDLLLSSMSLQELDLSSNGFSGSIAAVNSSTLNVLNLSRNSLSGSLPTSLGRCTVIDFSRNMFSGDISVIDNWEATMEVIDLSSNKLSGSLPSILGTYSKLSTLDLSFNELNGSIPVGLVTSPSLTRLNLSGNQFTGPLLLHGSGVSELLLMPPDQPMEYFDVSNNSLEGVLPSDIGRMIKLKQLNLARNGFSGQLPNELSKLIDLEYLDLSNNKFTGNIPDKLSNNLTVFNVSNNDLSGPVPEDLRRFPSASFYPGNKKLKLPNNSPERSAALPDNPDEGKHHSSKSNIRIAIILASVGATVMIVFVLLAYHRSQAKEFRGRSDFAGPATGRDAKLGGLSRPSLFKFHSNAQPSSSSLSFSNDHLLTSNSRSLSGQQSEFITEISEHCLPEGVVATSSAPPNLMDNPPMSSGRKSSPGSPLSSSPRFIEACEKPAMLDVYSPDRLAGELFFLDSSLAFTAEELSRAPAEVLGRSSHGTLYKATLDNGHMLTVKWLRVGLVKLKKEFAREVKKIGSMRHPNIVPLLAYYWGPREQERLLLADYIHGDNLALHLYETTPRRYSPLSFGQRIRVAVEVARCLLYLHDRGLPHGNLKPTNILLAGPEYSVCLTDYGLHRLMTPAGVAEQMLNLGALGYRAPELASASKPLPSFKADVYALGVILMELLTRKSAGDIISGQSGAVDLTDWVRLCEREGRVMDCIDRDIAGGEESSKEMDQLLATSLRCILPVNERPNIRQVFEDLCSISSA 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01409 1039 ProSiteProfiles Leucine-rich repeat profile. 253 275 IPR001611 GO:0005515
Tsu07g01409 1039 ProSiteProfiles Protein kinase domain profile. 758 1039 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01409 1039 MobiDBLite consensus disorder prediction 692 716 - -
Tsu07g01409 1039 Gene3D Ribonuclease Inhibitor 299 439 IPR032675 -
Tsu07g01409 1039 Gene3D Transferase(Phosphotransferase) domain 1 837 1039 - -
Tsu07g01409 1039 Gene3D Ribonuclease Inhibitor 29 190 IPR032675 -
Tsu07g01409 1039 PANTHER OS07G0626500 PROTEIN 15 1035 - -
Tsu07g01409 1039 SMART LRR_typ_2 495 519 IPR003591 -
Tsu07g01409 1039 SMART LRR_typ_2 125 149 IPR003591 -
Tsu07g01409 1039 SMART LRR_typ_2 251 273 IPR003591 -
Tsu07g01409 1039 SMART LRR_typ_2 274 298 IPR003591 -
Tsu07g01409 1039 SMART LRR_typ_2 173 197 IPR003591 -
Tsu07g01409 1039 MobiDBLite consensus disorder prediction 688 718 - -
Tsu07g01409 1039 SUPERFAMILY RNI-like 301 542 - -
Tsu07g01409 1039 Pfam Leucine rich repeat N-terminal domain 28 73 IPR013210 -
Tsu07g01409 1039 SUPERFAMILY Protein kinase-like (PK-like) 761 1033 IPR011009 -
Tsu07g01409 1039 Gene3D Ribonuclease Inhibitor 191 298 IPR032675 -
Tsu07g01409 1039 SUPERFAMILY L domain-like 53 351 - -
Tsu07g01409 1039 Pfam Protein kinase domain 762 1030 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01409 1039 Gene3D Phosphorylase Kinase; domain 1 739 835 - -
Tsu07g01409 1039 Pfam Leucine Rich repeats (2 copies) 102 143 IPR025875 -
Tsu07g01409 1039 Pfam Leucine Rich repeat 299 315 IPR001611 GO:0005515
Tsu07g01409 1039 Gene3D Ribonuclease Inhibitor 449 553 IPR032675 -
Tsu07g01409 1039 PANTHER OS07G0626500 PROTEIN 15 1035 - -
Tsu07g01409 1039 MobiDBLite consensus disorder prediction 549 577 - -
Tsu07g01409 1039 Pfam Leucine rich repeat 369 427 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01409 Tsu-Chr7 12583526 12589345 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01409 374 584 Receptor kinase-like Gene Family AT5G01890 32.420 2.39e-10 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu07g01409 Pkinase 1.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01409 - - gmx:100802768 1613.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01409 07 12583526 12589345 Tsu07g01409 07 12583526 12589345 ECH