Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01387 ATGGAATTGGTCGCCGGTAAGCTCCACCACCTCGACCTCACCGGAGCATTCATTCTAGACTCACGACGCATACCACGCACTCTAACTCATACTCATCTCACCATCAAACCAAACACTAACACTAATTTAGTTTATCCCAATCGATTATTCACCTCAAAAAAACCTAATTACACTTCACGTTTATCCGCCGTAACCGCCGTCGATGATACTCCAGTAGCAGAAGACGATATCGAGTCTCTATTTTCCGATACTTCAGCTGATGAACGACGCGGCAATAACAAACAATCATACACCGGCGCTTCAAGCGTTTCTTCCGGTGTGAAGTTGGAGAATATCAGTAAAACGTATAAAGGTGTTACGGTTTTGAAAGAGGTTAATTGGGAAGTGAAAAAAGGAGAGAAAGTTGGTTTGGTTGGTGTTAATGGTGCGGGGAAAACGACTCAGATGAGGATTATTGCTGGTCTTGAAGAACCGGATTCGGGGAATGTGATAAAGGCGAAACCGAATATGAAAATTGCGTTTTTGAGTCAAGAATTTGAGGTTTCACAGAGTAGGACTGTGAGGGAGGAGTTTATGAGTGCTTTTAAAGAGGAAATGGAGGTTGCGGGAAGGTTGGAGAAAGTGCAGAAGGCTCTTGAGGGTTCTGTTAATGATTTGGAGTTGATGGGGAGGCTTTTGGATGAGTTTGATTTGCTTCAGAAACGAGCACAAGCTGTTAATTTGGATGTTGTTGATTCGAAGGTTAGTAAATTGATGCCTGAGCTTGGTTTTGGCACCGAGGATTCAGATAGATTGGTTGCTTCTTTTAGTGGTGGATGGCAGATGAGGATGTGTCTTGGCAAGATTCTACTTCAGGACCCAGATTTGTTGTTGTTAGATGAACCGACTAATCACCTTGATCTTGACACCATTGAGTGGCTTGAAGAATATCTTAACAAGCAGGATGTGCCGATGGTTATCATTTCCCACGACAGAGCTTTTCTCGATCAACTATGTACGAAAATTGTGGAAACTGACATGGGTGTATCCAGGACATTTGAGGGAAATTATTCTCAGTATATACTATCAAAGGCAACTTGGATTGAAACACAGTATGCTGCATGGGAAAAGCAGCAGAAAGAAATTGAACAGACAAGAGAGTTGATAAGTAGGTTAGGTGCTGGAGCAAGTTCAGGCCGTGCTTCTTCCGCTGAGAAGAAATTGGAAAAACTTCTGGGAGAGGAACTAATAGAGAAGCCATTTGAAAGGAAACAAATGAAAATCAGGTTCCCTGTGCGTGGAAGCAGTGGAAGATCTGTTGTAACAGTTAAGAACTTGGATTTTGGCTTTGAGGATAAAACACTTTTCAACAAGGCAAATCTTACAATTGAAAGGGGAGAAAAGCTTGCCATTCTCGGTCCAAATGGATGTGGCAAGAGTACTTTACTAAAATTGATTATGGGTTTAGAGAAGCCAACTGGCGGTGAAGTTATCCTTGGGGAGCATAATGTATTGCCTAACTATTTTGAGCAGAATCAGGCTGAGGCGCTTGATCTGGAAAAGACAGTGCTTCAGACAGTAGAGGAAGCTGCAGAGGACTGGAGGAGTGATGATATTAAAGGGCTTCTTGGGCGTTGTAATTTTAAATCTGATATGCTTGATCGTAAAGTTTCTCTATTGAGCGGTGGTGAGAAGGCGCGGCTGGCTTTCTGCAAGTTCATGGTAAAACCATCAACTCTGCTTGTTTTGGATGAACCAACCAATCACTTGGATATACCTTCTAAAGAAATGCTTGAGGAGGCAATATCAGAGTATGAGGGCACTGTTATCACAGTATCTCATGATCGGTACTTTATAAAGCAGATAGTTAATAGAGTGATTGAAGTAAAAGATGGCGATTTACACGATTATGCTGGGGATTATAATTATTATTTGGAGAAGAATCTTGATGCTAGGGAAAAGGAGCTTGAACGCCAGGCAGAGCTTGAGGACAAAGCTCCTAAATTGAAAGCCAAATCTAAGATGTCCAAGGCCGAGAAAGAAGCAAGGAAGAAGCAAAAGATGCAGGCCTTTCAGGCAGGAAAACAGAAGTCTAAAAAGGCAGTGCAGTGTGCGTCGTTATCATCCGCCTCCGCCATTCATCTCAGTCTCTGGGACCTCTTACTCGAGGAAAGATTGTTTTTACAACCCAAGTTAGCTTTCTCCCTCACAGCGGTAATAATGGGTAAAGTTTTGCTAGGAATGCCGGGGCCATGGGCTGACGACTATCGTGAACCATCTGATCCTTATACTACTAAAATCGGAGGCCTCCCTGACTGGCCCCTTTCCGAGAATGCCATCAATACCAATTTGCTTCGTTGTGCTACCTGTGCCAATAGGCTCTCCCTCGTTGCACAGATTTATGCTCCTCTATCTAATCATCATCGCATTCTTTTCATTTTCGGCTGTGTTTTGCCCAAATGCGCAACCTCTTGGCGAGTTCTTCGACTTCAGAAACTTGCTGACGTGGAAACCTCTCAACCTAAACAAGTCGAAGTTCAAATTCCCAACTCAGGGGATGATGAAGACGAAAGCGATGATGACATGAGTTTTGAAGAACTGGCCAATGCACTTTATCAAGCTGGGACTTTGGCTTCTTCTAATTCTAAATCTAAGagcaagaaacaaaagaaaaaacgcCAACACAAATTCCCTACATCTTCTCCATATCAAGAACCAACAACAGCTTCTGAAGATGTTAACAATCATAATGATATTCCAGCGGTGccttgtttttatatatacacacagGAAGAGCCATCTACCGGGGATCTTAGTTCTGTATGTTCTAGCTACTCATCACTTTCTATTAAGGAGAATGGAAGTTCTGCTGAGGATAATATGCAAGCAGAAGAAACCTGGGAAAAGGAACAATATGAATATGATAAAGCTTTGACAGCTGATAGAACATACCTCAAGTTCAAGAAACGGTTGGATGCGTATCCTGAGCAGTGTTTTAGATATTCGCATGGTGGCAAGCCAATTTTAGCTGTAGCTAATGAAATAAACCCTGGAAGTTGCGGGATCTGTGGCAAACCAAGGCAATTTGAGATGCAACTAATGCCCCCATTACTATACTTTCTACAGGAAGCACTTGCTGACAACCAAAGACAGATGGTTGAAAACTGGGATTGGATGACCCTTCTCGTATATACTTGTCCTGAGAGTTGCTGTGAAGATAAACAAGTGAACTCCAATAGCAATGGCTGGATCGTAGCAGAGGAAGCTGTTGTAGCTCAATGTGAGGATTCCATGCCCATTCAACTGGGCTATTTCTCATGA 3300 0.4218 MELVAGKLHHLDLTGAFILDSRRIPRTLTHTHLTIKPNTNTNLVYPNRLFTSKKPNYTSRLSAVTAVDDTPVAEDDIESLFSDTSADERRGNNKQSYTGASSVSSGVKLENISKTYKGVTVLKEVNWEVKKGEKVGLVGVNGAGKTTQMRIIAGLEEPDSGNVIKAKPNMKIAFLSQEFEVSQSRTVREEFMSAFKEEMEVAGRLEKVQKALEGSVNDLELMGRLLDEFDLLQKRAQAVNLDVVDSKVSKLMPELGFGTEDSDRLVASFSGGWQMRMCLGKILLQDPDLLLLDEPTNHLDLDTIEWLEEYLNKQDVPMVIISHDRAFLDQLCTKIVETDMGVSRTFEGNYSQYILSKATWIETQYAAWEKQQKEIEQTRELISRLGAGASSGRASSAEKKLEKLLGEELIEKPFERKQMKIRFPVRGSSGRSVVTVKNLDFGFEDKTLFNKANLTIERGEKLAILGPNGCGKSTLLKLIMGLEKPTGGEVILGEHNVLPNYFEQNQAEALDLEKTVLQTVEEAAEDWRSDDIKGLLGRCNFKSDMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYEGTVITVSHDRYFIKQIVNRVIEVKDGDLHDYAGDYNYYLEKNLDAREKELERQAELEDKAPKLKAKSKMSKAEKEARKKQKMQAFQAGKQKSKKAVQCASLSSASAIHLSLWDLLLEERLFLQPKLAFSLTAVIMGKVLLGMPGPWADDYREPSDPYTTKIGGLPDWPLSENAINTNLLRCATCANRLSLVAQIYAPLSNHHRILFIFGCVLPKCATSWRVLRLQKLADVETSQPKQVEVQIPNSGDDEDESDDDMSFEELANALYQAGTLASSNSKSKSKKQKKKRQHKFPTSSPYQEPTTASEDVNNHNDIPAVPCFYIYTQEEPSTGDLSSVCSSYSSLSIKENGSSAEDNMQAEETWEKEQYEYDKALTADRTYLKFKKRLDAYPEQCFRYSHGGKPILAVANEINPGSCGICGKPRQFEMQLMPPLLYFLQEALADNQRQMVENWDWMTLLVYTCPESCCEDKQVNSNSNGWIVAEEAVVAQCEDSMPIQLGYFS 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01387 1099 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 49 691 - -
Tsu07g01387 1099 Pfam ABC transporter 336 423 IPR032781 -
Tsu07g01387 1099 Pfam ABC transporter 122 297 IPR003439 GO:0005524
Tsu07g01387 1099 MobiDBLite consensus disorder prediction 892 908 - -
Tsu07g01387 1099 MobiDBLite consensus disorder prediction 869 908 - -
Tsu07g01387 1099 MobiDBLite consensus disorder prediction 832 853 - -
Tsu07g01387 1099 Gene3D - 398 660 IPR027417 -
Tsu07g01387 1099 Gene3D - 104 388 IPR027417 -
Tsu07g01387 1099 Pfam ABC transporter 450 581 IPR003439 GO:0005524
Tsu07g01387 1099 ProSitePatterns ABC transporters family signature. 269 283 IPR017871 GO:0005524
Tsu07g01387 1099 ProSitePatterns ABC transporters family signature. 553 567 IPR017871 GO:0005524
Tsu07g01387 1099 CDD ABCF_EF-3 107 337 - -
Tsu07g01387 1099 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 342 IPR027417 -
Tsu07g01387 1099 SMART AAA_5 458 626 IPR003593 -
Tsu07g01387 1099 SMART AAA_5 131 346 IPR003593 -
Tsu07g01387 1099 MobiDBLite consensus disorder prediction 81 101 - -
Tsu07g01387 1099 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 107 365 IPR003439 GO:0005524
Tsu07g01387 1099 Coils Coil 645 681 - -
Tsu07g01387 1099 CDD ABCF_EF-3 434 625 - -
Tsu07g01387 1099 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 414 639 IPR027417 -
Tsu07g01387 1099 PANTHER ABC TRANSPORTER F FAMILY MEMBER 5 49 691 - -
Tsu07g01387 1099 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 434 649 IPR003439 GO:0005524
Tsu07g01387 1099 Pfam Programmed cell death protein 2, C-terminal putative domain 974 1086 IPR007320 GO:0005737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01387 Tsu-Chr7 12313358 12324271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01387 431 651 Calmodulin-binding Proteins AT2G36910 25.911 1.14e-12 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01387 - - gmx:100797121 1061.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01387 07 12313358 12324271 Tsu07g01387 07 12313358 12324271 ECH