Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01386 ATGGATATTAGCTATTTTGGAAACCCTAATCCTTCAAACCCTTATCATCACTATAGTAATAATATAgttccttcttcttcatctgaTTTCATTAACTTATCTGATTATCTTgtgcttgatgatgttgttttccttgataacaataataataacaatcaaGATTATTATACCTCGTCGTGGTCACAAAGTTCAGAAACTGAACAATCATCAGATAAGGCAGCTTCTAGTTCcactaccaccaccaccactgaTGTTGTCATTAATCAAGGATTAATTAGTGATGAAACCTCTATCAACAACATTAACACGATGACCACGACGACGATAAAGCGCAAAAATGGAGGGATGAAAGAAAATACGGTAGAAGTGAGCCCAAGAATCACGTTTAGAACACGATCGCAGCTTGAGATTATGGATGATGGATACAAATGGAGGAAATATGGAAAGAAAtctgtcaagaatagtccaaacccaagGAATTACTACAAGTGTTCAGGTGAAAGATGTGGAGTGAAGAAAAGAGTGGAAAGGGATAGGGAAGACTCGAACTATGTTCTAACAACTTATGAAGGTGTTCACAGTCATGAGTCCCCATGCACTTCTTACTACACTAGTCCAGTAGTGTCTTCTAATTTGGTCTTTTCCAATCAATGGCcttctgcaaactcatcatctTCTAATTAA 684 0.2953 MDISYFGNPNPSNPYHHYSNNIVPSSSSDFINLSDYLVLDDVVFLDNNNNNNQDYYTSSWSQSSETEQSSDKAASSSTTTTTTDVVINQGLISDETSINNINTMTTTTIKRKNGGMKENTVEVSPRITFRTRSQLEIMDDGYKWRKYGKKSVKNSPNPRNYYKCSGERCGVKKRVERDREDSNYVLTTYEGVHSHESPCTSYYTSPVVSSNLVFSNQWPSANSSSSN 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01386 227 Gene3D WRKY domain 125 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu07g01386 227 SUPERFAMILY WRKY DNA-binding domain 130 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu07g01386 227 ProSiteProfiles WRKY domain profile. 133 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g01386 227 SMART WRKY_cls 138 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g01386 227 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 20 203 IPR044810 GO:0003700
Tsu07g01386 227 Pfam WRKY DNA -binding domain 139 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g01386 227 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 20 203 - -
Tsu07g01386 227 MobiDBLite consensus disorder prediction 56 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01386 Tsu-Chr7 12307222 12309549 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01386 88 209 WRKY Transcription Factor Family AT5G64810 54.676 4.84e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu07g01386 WRKY 5.4e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01386 - - gmx:100127396 182.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01386 07 12307222 12309549 Tsu07g01386 07 12307222 12309549 ECH