Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01383 ATGATTGAATGGTGTCGCAAAGAGGCTACAAAAGCTGGATTTACTATCGTGATTGGGAAATCTGATAACGGTGGTAACCGAAGGAAACCGTATTTTTTATTGAGTTGCTCAAGAGGTGGTGTctacaaagaaaacaaaaggaaattaaagaaacaaGACACAGCAACGAAAACGCTTAAGTGTTCGTTCAGGCTGCGAGGTTACTTTTTGGCATCACAGGAATGGAAACTAAGTGTTGTATGTGGTGAACACAACCATGAGATGGCAAAAACCCTAGAAGGTTATACTCTTGCGGGACGTTTAAAACCGGAGGAGAAGGAGTGTGTCCAAGAGTTGACAAGGAATTTGGTGCCCCCAAAGAACATATTGACGACTTTGAAAGGGAGAAATCCAGAGagcaagacaaatatgaagcaaGTATACAATGCGCGCGAAAGGTTTAAAAAAAGTCTTAGGGGCGAAATGTCTGAAATGCAACAACTGTTAAAGTGTTATgaaactcacaaatatttttacaagtGTAGAACGGTTGGTGATGAAGACTCGTTCAATGTTGGTTTTGCCTTTATtgcgaatgaaaaagaagataatttcataTGGGCCCTTGAGACGTGTAAGAGTCTTTTGAAGAGTAAAGACACGTTTCCGAAGGTTATTGTCACTGATAGGGATAAGTCACTCATGAATGCGGTTCCGATAGTGTTTCCAAATTCTACCGCTTTAGTGTGTCGATATCATGTTGCAAAAAATGTAAGAGCTAAGTTCAAGGCCTTTTGCGgggcaaaagaaaaaaacctaGATCAGTTACTTAACACACTCACAGTTCAATGGGCATCAATTGTGCAATCGAGTTCAGAAGAGTCATATATTAGTGCAGTTGCTGAGTTCAGGAAAGTGTTTGGGAAATATCCAAATTTCCTAAACTATGTTGAACCAACAGTTTTGGATCCGGTGAAGGAAAATTTGTCAAAGCCATCTATTCCCAAGAGGAAGACTGCTCGCATTGGTAATTTGTCTCCTAATGCTATCCCTCGTCGTGTTATCAAATATATTGAGTATATGCCACTGttcatgcattcatatattGAGGACATTATTGATGTCAAGGGTGATGGTCATTGTGGTTTTCGCGTTGTAGCAGAGTATCTTAATAAGGGTGAAGATAACCATGTAGTAGTTCGGCATAAACTTATTAGAGAGTTAACTATGTTTAGGAAAGACTACTTGAGTATTTACCAAACTGAGGAACGTCTGCAATACATTCTGAACGGTTTGTATCCTCTGAAAGTTATGCCTAAGAGTGGCATTGCACTAATAGAAAATTGGTTAACTTTTCCGGATATGGGGCATATCCTTGCAACTGCCTACAACCgcgttgttgttgaattaacTACACATAAGATTGGCCATTCTGAAACATTTTTCCCATTGCGCGGTCGTCCACCATTGGATCCATCTGCACGCATGATGTGTATTGGTATGGTTCCGAATCATTGTGTGTATGTCAAATTGAAGGACGGGTGTCCACTGCCTCCAACTTGCAAGGAATGGAAAAATCATCGGGCGCCATAG 1572 0.3721 MIEWCRKEATKAGFTIVIGKSDNGGNRRKPYFLLSCSRGGVYKENKRKLKKQDTATKTLKCSFRLRGYFLASQEWKLSVVCGEHNHEMAKTLEGYTLAGRLKPEEKECVQELTRNLVPPKNILTTLKGRNPESKTNMKQVYNARERFKKSLRGEMSEMQQLLKCYETHKYFYKCRTVGDEDSFNVGFAFIANEKEDNFIWALETCKSLLKSKDTFPKVIVTDRDKSLMNAVPIVFPNSTALVCRYHVAKNVRAKFKAFCGAKEKNLDQLLNTLTVQWASIVQSSSEESYISAVAEFRKVFGKYPNFLNYVEPTVLDPVKENLSKPSIPKRKTARIGNLSPNAIPRRVIKYIEYMPLFMHSYIEDIIDVKGDGHCGFRVVAEYLNKGEDNHVVVRHKLIRELTMFRKDYLSIYQTEERLQYILNGLYPLKVMPKSGIALIENWLTFPDMGHILATAYNRVVVELTTHKIGHSETFFPLRGRPPLDPSARMMCIGMVPNHCVYVKLKDGCPLPPTCKEWKNHRAP 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01383 523 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 181 322 - -
Tsu07g01383 523 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 91 162 - -
Tsu07g01383 523 Pfam MULE transposase domain 179 250 IPR018289 -
Tsu07g01383 523 Gene3D - 359 425 - -
Tsu07g01383 523 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 181 322 IPR031052 GO:0006355
Tsu07g01383 523 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 91 162 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01383 Tsu-Chr7 12290937 12294818 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu07g01383 MULE 2e-14 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01383 - - mtr:MTR_3g072200 227.639