Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01382 ATGTCAACAACAAATATTGTTAACCACCATAGTTTGTTTGATCAAGAACAAGATCATGAGATCCATATGCAAACAGGGTTCAATATTCCTTTCCCTTCAAACATGACCTTACCTCCTTTAGGTAATTGCCATGATCAATCTTTGAAAGGTATAAGTGCAATAACTCCTTCATCACTTTCTCCTGAAGCTGCAAATTTTGCTCAAACACTCCTTGCATCAGCTGTTCAAAAACCGCGACAATTCGAAGATCTAAATGATCTCACTTCTAGTTTTGGTGGAGCAGGCCAACTCCTTTCCTTGAATAGATCAAGAGGAAATTCATGGGCATGGGGAGATCAAGTAAGTGATTGTTTGATGAGTAAAAGAAGTAGTGGAGGGGATGATCATAGTCATCATATAGGGGTTTCTTCTACCataaagatgaagaaaatgaagggAAGAAGAAAGGTGAGGGAGCCTAGGTTTTGCTTCAAGACTATGAGTGAAGTGGATGTGTTGGATGATGGTTACAAATGGAGGAAGTATGGACAGAAAGTGGTCAAGAACACACAGCATCCAAGAAGCTACTACCGTTGCACACAAGATAATTGTAGAGTAAAGAAACGTGTGGAGAGATTGGCCGAGGATCCAAGAATGGTGATAACTACATATGAAGGAAGACATGCTCATTCTCCATCAAATGAACTTGAAGACTCACAAACTCACTCTGAACTCACTAATTTCTTTTGGTAA 732 0.3852 MSTTNIVNHHSLFDQEQDHEIHMQTGFNIPFPSNMTLPPLGNCHDQSLKGISAITPSSLSPEAANFAQTLLASAVQKPRQFEDLNDLTSSFGGAGQLLSLNRSRGNSWAWGDQVSDCLMSKRSSGGDDHSHHIGVSSTIKMKKMKGRRKVREPRFCFKTMSEVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHSPSNELEDSQTHSELTNFFW 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01382 243 MobiDBLite consensus disorder prediction 220 243 - -
Tsu07g01382 243 SMART WRKY_cls 166 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g01382 243 Pfam WRKY DNA -binding domain 167 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g01382 243 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 41 235 - -
Tsu07g01382 243 Gene3D WRKY domain 151 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu07g01382 243 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 41 235 IPR044810 GO:0003700
Tsu07g01382 243 ProSiteProfiles WRKY domain profile. 161 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g01382 243 SUPERFAMILY WRKY DNA-binding domain 158 225 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01382 Tsu-Chr7 12276922 12279331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01382 133 243 WRKY Transcription Factor Family AT4G39410 80.172 2.16e-65 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu07g01382 WRKY 6.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01382 - - gmx:100799241 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01382 07 12276922 12279331 Tsu07g01382 07 12276922 12279331 ECH