Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01381 ATGAATCCACCATACATAACCAACACTCTTTTACTCCTTCTTTCTCTATTTCTCCTCCACTTAGCACCATGTCGTTGTGCTACCTTAGACCCATCTTCTCAACTTCTCAACTTCAAAAAATCTCTCCCAAACCCATCACTTCTTCATGATTGGCTTCCAAATAATAACCCATGTTTATTCACAGGTATCACCTGCAACCAAACCACCATAACTTCCATACACCTTACTTCCATCTCTCTCAACATCAACCTCACCGTTATCGCCACCCATCTTCTCACCATCGACCACCTTCAAACCCTTACTCTCAAATCAACAAACCTCACTACTTCCCCCATTTCACTTTCCCATTTAAAGTGCACTCCTTCACTCACCACCATAGATCTCTCACAAAACACtttctcttcatctttctcCGACTGGTCTTTTCTTTCATTATGTTCATCTCTTACATCTCTTAACCTCTCCAAAAACggtatcaattttgattttcctAAATGGAGTTTCAGTACAACTCTCCGTTTACTTGACCTTTCCGGTAACAAGATTTCCGGTCCAGGTTTCTTTCCATGGTTAATTAACCATGAGTTAGAGTTTTTATCTCTCGCCGGAAACAAAATTACCGGCGAAATCGATTTCTCCGGTTACACTTCTCTTAAGTATTTGAACCTTTCTGCTAACAATTTCAGTGTTTCTGTTCCTTCTTTTGGTGAATGTTCTTCTCTTCAATCTCTAGACCTCTCTGCAAACAAGTACTTCGGCGACATTACCAGAACTCTTTCTCCTTGTAAGCATCTTCTTCATCTTAACCTTTCCGATAACCAGTTCACCGGTCCGGTTCCGTTAATTCCATCCGGTTCGATACAGTTTCTCTACCTAGCGAAAAACCACTTCGCCGGAAGAATTCCGGCGCGTCTTGCTGACCACTGCTCTACTCTAGTGGAACTGGATCTTTCTTCTAACAACCTCACTGGTCCAATTCCACGCGAGTTCGGCGCGTGTAGTTTGTTGGAATCTTTCGACATATCGAACAATATGTTCTCCGGTGAACTTCCGATGGAAGTTATAACGGAGATGAGTAGTTTGAAGGAACTTGTAGTGGCGTCTAACGAATTTTCCGGTGAATTACCAGTGTCGTTGTCGAAGTTAACGGCTTTAGAATCGTTAGATCTGAGTTCGAATAACTTCACCGGAACAATTCCTAATTGGATTTGTGAAGGAGAAATAGGGAATAATTTGAAGGGAATTTACCTGCAAATTAACGGTTTCACGGGTTTTATTCCACCAACTTTGAGTAACTGTTCTAACCTTGTTGCTCTTGATTTAAGCTTCAATTATTTGACGGGAACAATTCCTCCAAGTTTAGGTTCACTTACGAAGCTTCGTGATTTAATCTTGTGGTTGAATCAGCTTCATGGTGAAATTCCTCAAGAGCTTCAAAATATGGAGAGTTTGGAGAATTTGATTCTTGATTTCAATGACTTGAGTGGAAGCATTCCTGATGGGCTAATGAATTGCACCAAGTTGAATTGGATCTCGCTTTCGAACAACAGGCTTAGCGGGGAGATTCCGAAATCGATTGGGAAGCTTCCTAATCTTGCTATTTTGAAGCTGAGCAATAACTCGATCTCTGGGGAGATTCCGCCGGAGCTTGGAGATTGTCCTAGCTTGTTATGGTTGGATCTGAATACAAATTTACTTACAGGAACAATACCTCCTGAATTGTTCAAGCAAGCGGGAAAAATTGTGATTAATCACATTAGCAGCAAGCCGTATGTATACATTAAGAATGATGGTAGTAGAGGGTGTAATGGAGCTGGAAGCTTGTTGGAATTTGCAGGGATTAGTCAGCTGAAATTGAATAGAATTTCGCCGAGGAACCCTTGCAATTTCACTAGGGTTTACAAAGGTAGCCTTCAGCCAGTGTTTACTCTTAATGGTTCAATGATCTTTTTTGATATTTCACACAACCATTTGTCTGGTCCTATTCCTAAGGAAATTGGTGAAATGCAATTTCTCTACATTTTGCATATGAGTCATAATCACTTATCTGGTAGCATTCCTCAAGAGCTTGGTAAGATGAAGAATCTCAACATTCTTGATCTTTCATACAATGAGCTAGGGGGTCAAATTCCAGAAACCATGACACGGCTTTCATCGCTCACTGAAATGTACCTGTCCAACAATTTTCTCTCCGGATCGATTCCAATGTCCGGTCAATTTGATACGTTTCAGGCTGTTAGTTTTCAGAACAACTCTGGTCTATGTGGTGGTCCTCTTCCTGCGTGTGGGTCGGACTCTGCAACAGGGGCGAGTTCACGGCATCAGAAGTCTCATAGGAGACAGGCGTCACTTGCAGGGAGTGTGGCAATGGGGTTGCTTTTTGCTCTTTTCTGTATTTTCGGTTTGATCTTAATTGCTGTTGAGACAAAAAAGAGGAGGAAGAAAAAGGAGGCTGCTATTGATGGCTACATTGACAATTCTCATTCGGGTAATGGCAATAATTCTGGCTGGAAACTGACCAGTGCCCGCGAAGCTCTCAGTATAAACCTCTCAACGTTTGAAAAGCCCCTTCGAAAGCTCACTTTTGCGGATCTTCTGGAGGCAACCAATGGCTTTCACAATGATAGTCTCATTGGTTCAGGTGGTTTCGGTGACGTGTATAAAGCTCAGTTGAAGGATGGAAGTGTTGTGGCCATCAAGAAGCTGATACATGTAAGTGGACAAGGGGACAGAGAATTCACAGCTGAAATGGAAACCATTGGAAAAATCAAGCACAGAAACCTTGTTCCTCTTCTCGGATACTGCAGAGTTGGAGAGGAAAGACTGTTGGTTTATGAGTACATGAAATATGGAAGTCTAGAAGATGTCCTCCACGACCCAAAGAAAGCTGGAATCAAGATGAATTGGTCAGTGAGGAGGAAGATTGCAATTGGGGCTGCAAGGGGATTGGCTTTTCTTCATCATAGTTGTATCCCCCATATCATTCACAGGGACATGAAATCAAGCAATGTGTTGCTCGATGAAAATTTGGAAGCAAGGGTCTCTGATTTTGGAATGGCTAGGCTTATGAGTGCTATGGACACACATTTGAGTGTAAGCACATTGGCGGGCACACCCGGTTATGTTCCTCCAGAATACTATCAGAGCTTTAGATGCTCCACTAAAGGTGATGTTTATAGTTATGGTGTAGTTTTGCTGGAGTTGCTGACGGGGAGAAGACCAACGGATTCAGCTGATTTTGGTGATAACAATCTTGTTGGATGGGTTAAACAACATGCCAAACTTAAAATAAGTGATGTTTTTGATCAAGAGCTTATGAAAGAAGATCCCAATATGGAGATTGAGCTTTTGCAGCATTTAAAGGTAGCTTGTGCTTGTTTGGATGATAGACCTTGGAGGAGACCTACAATGATTCAAGTCATGGCAATGTTCAAGGAAATACAAGCAGGTTCTGGTGGTATGGATTCTCAGTCTACTATAGCCACTGAAGATGAAGGTTTCAATGCCATTGAAATGGTTGAGATGAGCATAAAAGAAGTCCCTGAATTAAGCAAGCACTAG 3561 0.4156 MNPPYITNTLLLLLSLFLLHLAPCRCATLDPSSQLLNFKKSLPNPSLLHDWLPNNNPCLFTGITCNQTTITSIHLTSISLNINLTVIATHLLTIDHLQTLTLKSTNLTTSPISLSHLKCTPSLTTIDLSQNTFSSSFSDWSFLSLCSSLTSLNLSKNGINFDFPKWSFSTTLRLLDLSGNKISGPGFFPWLINHELEFLSLAGNKITGEIDFSGYTSLKYLNLSANNFSVSVPSFGECSSLQSLDLSANKYFGDITRTLSPCKHLLHLNLSDNQFTGPVPLIPSGSIQFLYLAKNHFAGRIPARLADHCSTLVELDLSSNNLTGPIPREFGACSLLESFDISNNMFSGELPMEVITEMSSLKELVVASNEFSGELPVSLSKLTALESLDLSSNNFTGTIPNWICEGEIGNNLKGIYLQINGFTGFIPPTLSNCSNLVALDLSFNYLTGTIPPSLGSLTKLRDLILWLNQLHGEIPQELQNMESLENLILDFNDLSGSIPDGLMNCTKLNWISLSNNRLSGEIPKSIGKLPNLAILKLSNNSISGEIPPELGDCPSLLWLDLNTNLLTGTIPPELFKQAGKIVINHISSKPYVYIKNDGSRGCNGAGSLLEFAGISQLKLNRISPRNPCNFTRVYKGSLQPVFTLNGSMIFFDISHNHLSGPIPKEIGEMQFLYILHMSHNHLSGSIPQELGKMKNLNILDLSYNELGGQIPETMTRLSSLTEMYLSNNFLSGSIPMSGQFDTFQAVSFQNNSGLCGGPLPACGSDSATGASSRHQKSHRRQASLAGSVAMGLLFALFCIFGLILIAVETKKRRKKKEAAIDGYIDNSHSGNGNNSGWKLTSAREALSINLSTFEKPLRKLTFADLLEATNGFHNDSLIGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCRVGEERLLVYEYMKYGSLEDVLHDPKKAGIKMNWSVRRKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGRRPTDSADFGDNNLVGWVKQHAKLKISDVFDQELMKEDPNMEIELLQHLKVACACLDDRPWRRPTMIQVMAMFKEIQAGSGGMDSQSTIATEDEGFNAIEMVEMSIKEVPELSKH 1186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01381 1186 Pfam Leucine rich repeat 672 728 IPR001611 GO:0005515
Tsu07g01381 1186 Pfam Leucine rich repeat 507 566 IPR001611 GO:0005515
Tsu07g01381 1186 Pfam Leucine Rich repeat 308 324 IPR001611 GO:0005515
Tsu07g01381 1186 Pfam Leucine Rich repeat 262 277 IPR001611 GO:0005515
Tsu07g01381 1186 Pfam Leucine Rich repeat 169 186 IPR001611 GO:0005515
Tsu07g01381 1186 Gene3D Transferase(Phosphotransferase) domain 1 948 1149 - -
Tsu07g01381 1186 ProSiteProfiles Protein kinase domain profile. 872 1147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01381 1186 ProSitePatterns Protein kinases ATP-binding region signature. 878 901 IPR017441 GO:0005524
Tsu07g01381 1186 SMART LRR_typ_2 554 577 IPR003591 -
Tsu07g01381 1186 SMART LRR_typ_2 457 480 IPR003591 -
Tsu07g01381 1186 SMART LRR_typ_2 529 553 IPR003591 -
Tsu07g01381 1186 SMART LRR_typ_2 693 717 IPR003591 -
Tsu07g01381 1186 SMART LRR_typ_2 382 406 IPR003591 -
Tsu07g01381 1186 SMART LRR_typ_2 481 505 IPR003591 -
Tsu07g01381 1186 Gene3D Ribonuclease Inhibitor 35 762 IPR032675 -
Tsu07g01381 1186 PRINTS Leucine-rich repeat signature 312 325 - -
Tsu07g01381 1186 PRINTS Leucine-rich repeat signature 693 706 - -
Tsu07g01381 1186 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 10 1157 - -
Tsu07g01381 1186 SMART serkin_6 872 1144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01381 1186 SUPERFAMILY L domain-like 639 758 - -
Tsu07g01381 1186 Coils Coil 467 487 - -
Tsu07g01381 1186 Gene3D - 584 644 - -
Tsu07g01381 1186 Pfam Leucine Rich Repeat 385 404 IPR001611 GO:0005515
Tsu07g01381 1186 PANTHER SYSTEMIN RECEPTOR SR160 10 1157 - -
Tsu07g01381 1186 SUPERFAMILY RNI-like 54 280 - -
Tsu07g01381 1186 Gene3D Phosphorylase Kinase; domain 1 833 947 - -
Tsu07g01381 1186 Pfam Leucine rich repeat N-terminal domain 35 66 IPR013210 -
Tsu07g01381 1186 SUPERFAMILY L domain-like 196 575 - -
Tsu07g01381 1186 Pfam Brassinosteroid receptor island domain 579 643 IPR045381 -
Tsu07g01381 1186 SUPERFAMILY Protein kinase-like (PK-like) 858 1148 IPR011009 -
Tsu07g01381 1186 CDD STKc_IRAK 878 1147 - -
Tsu07g01381 1186 ProSitePatterns Serine/Threonine protein kinases active-site signature. 994 1006 IPR008271 GO:0004672|GO:0006468
Tsu07g01381 1186 Pfam Protein kinase domain 872 1142 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01381 Tsu-Chr7 12254631 12258967 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01381 34 1182 Receptor kinase-like Gene Family AT4G39400 65.893 0.0 1443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Tsu07g01381 Pkinase 4.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01381 K13415 - gmx:100499629 1729.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01381 07 12254631 12258967 Tsu07g01381 07 12254631 12258967 ECH