Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01362 ATGGATTTGGACGATTTCCGATCGATTTTAGATACGGCTGGCGTTGACGTATGGATGTTTATCGACACCGCGATTTCCGTCGCTTCTCATGATAACGCCGGTGAGTTGAAACGTCGAAGAGACGGAATCGTTGAGCGACTTTACGCCGCCACGACTGCTGCTCCGGTTTGTATGAATTGCGACGGCGGTAACCGTCTCGTGAGTGATGGAAATCAAGTTAAGAAAGAGAATAGTCCTAGCTTAAGCCCTGAACGTCAACAGCGTCGCGGCGGTGGTTCTCCGGCAACGCCGCAATCTCAGGGAAACGAGGatggtgaagatgaagagataGATCCTTATGGTGGTTTGTTCGAAGATGAACAGAAGAAGATTCTAGAGATTAAGGAGCTTCTAGAAGATCCTCACCagtcTGATGAATCTTTGATGGAGTTGCTGCAAAATCTGGTTGATATTGATATTACATTCCAAGAGTTGAAgGAAACTGACATCGGTCGTAACGTGAATCAGCTGCGAAAACATCCATCAAGCGATGTTCGCCGATTGGTGAAGCTACTTGTCAAGAAGTGGAAAGAGATTGTGGATGAATGGGTGAAGAGGAATCCACAGGGAGGGAAAAACACTCTGATGGGTAATCTTAATTTGTTTTGGGATTATTTGTCAAAGAGTTAA 669 0.441 MDLDDFRSILDTAGVDVWMFIDTAISVASHDNAGELKRRRDGIVERLYAATTAAPVCMNCDGGNRLVSDGNQVKKENSPSLSPERQQRRGGGSPATPQSQGNEDGEDEEIDPYGGLFEDEQKKILEIKELLEDPHQSDESLMELLQNLVDIDITFQELKETDIGRNVNQLRKHPSSDVRRLVKLLVKKWKEIVDEWVKRNPQGGKNTLMGNLNLFWDYLSKS 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01362 222 SMART TFS2_5 124 195 IPR003617 GO:0005634
Tsu07g01362 222 MobiDBLite consensus disorder prediction 70 101 - -
Tsu07g01362 222 Pfam TFIIS helical bundle-like domain 144 193 IPR017923 -
Tsu07g01362 222 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 121 206 IPR035441 -
Tsu07g01362 222 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 205 IPR044790 -
Tsu07g01362 222 ProSiteProfiles TFIIS N-terminal domain profile. 119 196 IPR017923 -
Tsu07g01362 222 MobiDBLite consensus disorder prediction 68 113 - -
Tsu07g01362 222 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 205 - -
Tsu07g01362 222 CDD TFIIS_I 121 194 - -
Tsu07g01362 222 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 117 206 IPR035441 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Tsu07g01362 Med26 2.6e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01362 - - gmx:100790582 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01362 07 11992590 11995712 Tsu07g01362 07 11992590 11995712 ECH