Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01361 ATGACACTTCTTCTCCGAAAAAATCTTCTATTTTTCACTTCTTCACATTCTACATTTCAACCTCGCAAACTTCTTCTTCGCCTTCAACTCTGTgagttttcatcttcttccactcCGTATTCTCACTGGAAGCGTCAAGATGAAGAATCACGCACTGTTAGGGTTTCTGTTTGGTGGGATTTCGAGAACTGCGGTGTCCCTGCTGGTGTTAATGTTTCCAGAGTAGCACCTGCTATCACTAACGCCGTTAGAGCTAACGGTATTAAAGGTCCTGTTCATATTACCGCTTTTGGTGATGTTTTACAGCTTTCTAGACCTAATCAAGAAGCTCTTGCTTTCACTGGGATTCATCTTTCTCATATTCCCAATGGTGGAAAGAATAGTGCTGATAGATCTCTTCTTGTTGATCTTATGTATTGGGTTTCCCAAAATCCCCCGCCTGCACATCTCTTTCTGATATCTGGTGATAGAGACTTTGCTGGCATATTACACCGATTAAGGATGAACAACTACAATATCTTGCTTGCAATTCCAGGAAAGGCTCCTGATGTTCTTTGCAGTGCATCAACCATAATGTGGCAGTGGTCTTCATTGCTCAAAGGAGAAAATCTAACTGGGAAGCATTTCAACCACCCTCCTGATGGTCACTTTGGTTCTTGGTATGGAAACTCTAAAGTGCCTCTTGAAAACCCCTTTTCAGCTGCCGAGCAGTCTCCATCTCCACAAAAAGTACAGATTGTGGAAATCAATGAACCTTCCTCAGACTTAAAGTCAGCTGGAGGAGAACCAAAGTCAGTTATTAGGATTATTAAACATATATTGAATTTACATCCAAATGGTATCTCCATTTCAGATCTTCGTGCAGAGCTGACAAAATGTAATGTGTCATTGGGTAGAAACGTATTTGGATATAAAAGGCTTTACCGCTTTCTATCATCAATACCAAATGTACATCTCCAGAATGTAGGAAATGGTAATGGTAATTTTTGTGTGAAGTTGCTCCCCTCAGAGTTCCCCGAACCCTCTGAAAGCAGCACTACTCTATCAACGGCATCTGCTATTAAGAATGAGGAGAGGGGCTACACAACAACTCCAAAGCTACACAGTGAAGATAAAGACATGGATAAAGACGAATATAGGAGTCCATTATATTCATTGCAGGAAGGGATCAATGAAGATGATTCAAAATCATTCCAATCTAGCCCTTCACAAGAAAGACCTATCGAGGAAGATATGCCACATGAATCATCTATACACAGTGAGAAGGTTGTGGATGTGTCTAATGCACAACTGTCGGAAAGTCAACTTTCACCAAAGGACATTGATGATTCCAAAACTGAGATTGGTTCCTTTAAAGTAAGATCTAACAAGTTGTTTGATGATGACATTGTTAGGTCAGAAGATGTAAGTCCAAAAGTTCTTGAAGAATATACCAATTCAGGGAATCCTGCTGCTGGTATTGATCACACAATGGTGGAAAACAATGATATAGCAAGTTATGAATCTGGAAAATCTATGGCAAAGAACAAACATGGGAATCAACCTAGAAAGGAGGTGGATGATCAAAGCCGATATTCTTCAGCAGCTGATGACTCTCTAGTTGAGAAAAGACCTGATGGTTGTGTTGAAACTTTCAGCAAAAGATCAACTTTCTTTAGCTGGATTAGAAGTTGGTGGCCATTTTGGAAAAGCAATGCAAAGGCTGATGGTTTGACTGCTCATCATAATAAGGTGACTAGTAATTTTGAGGATTCAAAGTCATCTGAACTGAATCATACTGCTAGTAATCTTGAAGAGCCCAAACCATTAGAACCACACCAGGATGTCAGTCATTCTGGAAAGCTTGAGGACTCCAAGTTATCTGAACTAGACCAGACTGCTAATAAACTTGAAGAGCCCAAGCGATTAGAACCACATCAGGATGTCAATCAATCAGGAAAGCCTGTGTTATTTTCTAGTGGTTCCTTTTGGAATGACATGGAATCTTTTGTTTTCAGCCCCAAAGGATCGCTTCTTTTTTCCCAGTCTAGAAGCAGGGAGGATTTGGCGCACAAATTACAAAAGTATCAACCTGTGGTTCTCAAATCTCTTACTAAAAATGATATCTTTCAATTGGTGGAATTGTTAATAGCAGAAAAAAAATGGTTGGAGGAAAGCCCCTCACAACCATTTCCTTTTAAACTAACTCGATCAGTTCAGAAGAGTGTGTCAGGCCTGTCTAATGGTTCAAATGATTTGATATCTCTCTTTGTAAGTAGAACATCGCACTCCAACTTACAAAAGTCGTTTGAAAATGACGGGGAGAAACACACTCGGAGTATTCAGCAAATGGGAGTTCCCAGACTTGCCACTGAAAAGAAACATACTAAGAGGTCTAGAAGTGGTAGTATATTACAAGATTGTCAGAAACTGGTAACTGATATATTGAGGGAACATCCAGAGGGATATAATATAGGCTGTCTTCGAAGACAATTTAATGATAGATATGGCTATGAACTTGATCTGAAGAAGCTTGGTTATAAGAAGATGGTAGAATTGATACAGACAATGCCTGGGGTTAAAGTAGAATCCTGTTATATGTATCCTTCTGACTCAGAAACTTCTATCCTCAAAACTCTAGCAACCAATGCCAGTCATGAAAAGTTCAACTCAGATAGTGAATTATCTGATACAGCCCCAAAAGAGGATAACATGGAATCTCCTTGGGAGGAATTAGGCCCTGTTTCTGCTAAAAACCTTGGTCAGAATGatttgaaatcaaatttaaGTCAGAAAGCAATCGAACTGGACACACCAAAGAATCCTGATTATGAACCTGTTGTCTTGGATTATGATTCTTCTGATACTGAAGAGGATAGCTCTTGTTTAACTCAGCCAAAAGATCAGGGAAAGCCAAAATATGACGAGCAAGACAGTTCTTTTTGGCAAGCTCTGGATTCCTGGCATAGCACCAAGGAAGAAGAGAATAGAGTCCATAAATCCGAAGACATTGTTAACTCGAGCAATTCTCTGCATGACATACTAGATTCATCCACAGAATCCAAGGAAGAAGAGAATAGAGTCCATAAATCCGAAAACATTGTTAAGTTTAGCAATGCTCTGCTGGACATATTAGATTCATCCACAGAATCCAAACAGGGTGTTATCGTTTCCAAAAATACTTCAGGGAATTATAGACAAAAGCAAAGATCTCAAAAGTATTCATTTGTTGCTGACCCAGACTTACCCAACAAGGACAAGCTTTTTGGTGATGAGTCAAAGATGCAAAACTGA 3273 0.392 MTLLLRKNLLFFTSSHSTFQPRKLLLRLQLCEFSSSSTPYSHWKRQDEESRTVRVSVWWDFENCGVPAGVNVSRVAPAITNAVRANGIKGPVHITAFGDVLQLSRPNQEALAFTGIHLSHIPNGGKNSADRSLLVDLMYWVSQNPPPAHLFLISGDRDFAGILHRLRMNNYNILLAIPGKAPDVLCSASTIMWQWSSLLKGENLTGKHFNHPPDGHFGSWYGNSKVPLENPFSAAEQSPSPQKVQIVEINEPSSDLKSAGGEPKSVIRIIKHILNLHPNGISISDLRAELTKCNVSLGRNVFGYKRLYRFLSSIPNVHLQNVGNGNGNFCVKLLPSEFPEPSESSTTLSTASAIKNEERGYTTTPKLHSEDKDMDKDEYRSPLYSLQEGINEDDSKSFQSSPSQERPIEEDMPHESSIHSEKVVDVSNAQLSESQLSPKDIDDSKTEIGSFKVRSNKLFDDDIVRSEDVSPKVLEEYTNSGNPAAGIDHTMVENNDIASYESGKSMAKNKHGNQPRKEVDDQSRYSSAADDSLVEKRPDGCVETFSKRSTFFSWIRSWWPFWKSNAKADGLTAHHNKVTSNFEDSKSSELNHTASNLEEPKPLEPHQDVSHSGKLEDSKLSELDQTANKLEEPKRLEPHQDVNQSGKPVLFSSGSFWNDMESFVFSPKGSLLFSQSRSREDLAHKLQKYQPVVLKSLTKNDIFQLVELLIAEKKWLEESPSQPFPFKLTRSVQKSVSGLSNGSNDLISLFVSRTSHSNLQKSFENDGEKHTRSIQQMGVPRLATEKKHTKRSRSGSILQDCQKLVTDILREHPEGYNIGCLRRQFNDRYGYELDLKKLGYKKMVELIQTMPGVKVESCYMYPSDSETSILKTLATNASHEKFNSDSELSDTAPKEDNMESPWEELGPVSAKNLGQNDLKSNLSQKAIELDTPKNPDYEPVVLDYDSSDTEEDSSCLTQPKDQGKPKYDEQDSSFWQALDSWHSTKEEENRVHKSEDIVNSSNSLHDILDSSTESKEEENRVHKSENIVKFSNALLDILDSSTESKQGVIVSKNTSGNYRQKQRSQKYSFVADPDLPNKDKLFGDESKMQN 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01361 1090 PANTHER LIMKAIN B LKAP 10 995 IPR024768 GO:0005777|GO:0010468|GO:1903231
Tsu07g01361 1090 MobiDBLite consensus disorder prediction 361 382 - -
Tsu07g01361 1090 MobiDBLite consensus disorder prediction 1044 1067 - -
Tsu07g01361 1090 MobiDBLite consensus disorder prediction 985 1023 - -
Tsu07g01361 1090 ProSiteProfiles OST-type HTH domain profile. 797 874 IPR025605 -
Tsu07g01361 1090 MobiDBLite consensus disorder prediction 504 537 - -
Tsu07g01361 1090 Pfam NYN domain 54 189 IPR021139 GO:0004540
Tsu07g01361 1090 Gene3D - 792 861 IPR041966 -
Tsu07g01361 1090 CDD PIN_limkain_b1_N_like 54 178 - -
Tsu07g01361 1090 MobiDBLite consensus disorder prediction 1009 1023 - -
Tsu07g01361 1090 MobiDBLite consensus disorder prediction 880 915 - -
Tsu07g01361 1090 Pfam OST-HTH/LOTUS domain 798 857 IPR025605 -
Tsu07g01361 1090 Pfam OST-HTH/LOTUS domain 266 326 IPR025605 -
Tsu07g01361 1090 Gene3D - 260 337 IPR041966 -
Tsu07g01361 1090 MobiDBLite consensus disorder prediction 511 537 - -
Tsu07g01361 1090 MobiDBLite consensus disorder prediction 599 620 - -
Tsu07g01361 1090 MobiDBLite consensus disorder prediction 954 968 - -
Tsu07g01361 1090 MobiDBLite consensus disorder prediction 883 901 - -
Tsu07g01361 1090 ProSiteProfiles OST-type HTH domain profile. 262 335 IPR025605 -
Tsu07g01361 1090 MobiDBLite consensus disorder prediction 388 406 - -
Tsu07g01361 1090 MobiDBLite consensus disorder prediction 928 970 - -
Tsu07g01361 1090 MobiDBLite consensus disorder prediction 1044 1090 - -
Tsu07g01361 1090 MobiDBLite consensus disorder prediction 580 620 - -
Tsu07g01361 1090 MobiDBLite consensus disorder prediction 339 419 - -
Tsu07g01361 1090 PANTHER EMB|CAB71880.1 10 995 - -
Tsu07g01361 1090 MobiDBLite consensus disorder prediction 339 359 - -
Tsu07g01361 1090 MobiDBLite consensus disorder prediction 580 595 - -
Tsu07g01361 1090 CDD LOTUS 798 855 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01361 53 201 C2H2 Transcription Factor Family AT5G61190 44.966 4.43e-37 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01361 - - mtr:MTR_3g095410 1379.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01361 07 11980923 11988058 Tsu07g01361 07 11980923 11988058 ECH