Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01360 ATGGGTGAAATAGGTCCATATTTAGCAGTGTTTATAATACAATTAATTTATTCTGGTATGACTTTGTTGTCTAAGGCTGTGTTCAATGGAGGAATGAAAACCtctgtgtttgttttttatagACAACTTATTGGAGCCATTGTTATGGTCCCTCTAGCTTTGATATTTGAAAGGAAACAAGCTGTGCCAGTGACATTCTCATTTATGACCATATTCAAGATTTTTATGCTTTCATTATTGGGaattactttaacTCTGAATGTGCATGGTATTGCACTTTCTTATACGTCTGCTATGTTGGCTGCTGCAATTGTTAATTGCCTCCCTGCTTCTACATTCTTCTTTGCTGTTTTGCTCAGAGTGGAGAAGGTAAATTTAAGGACAAAATCTGGAATTTCAAAGATAGGGAGTGTATTATTGTGCATGGCTGGTGTAGCAATCCTTGCAATTTACAAAGGACCTCAGTTACCGGTTCATCATCTCCTATCTAGATATCATCACAACAATCAACAACATGAAGATCACTTTTCATATAACAAAAAATGGATTTTAGGTTCTTTACTCTTATTCCTAGCTACCATCATGTGGAGTTTGTGGCTTGTACTTCAGgcTCAGTTACTTAAAAGTTACCCTTCAAAGTTAACATTCATGAGCATTCAGAGCTTAGCAAGTGCAACTCAGTCATTTTTTATTGCCATAGCTTTTGAAAGAGATATTGAGCAGTGGAAGTTGGGATGGAACATGAGACTGCTAGCAGTTGTTTATTGTGGGACACTAGTGACTGCAGTTGCATACTACCTGCAAGCATTAGTGATTGATAAGAAAGGACCAGTTTTCCCAGCAACCTGGAACCCACTGAGCTTTATAATTGCTACCATTGGTTCTGTTTTGCTCTTGGGAGAGCCGGTGTGTTTAGGAAGTGTTTTGGGTGGTATTCTGCTGGTTTTAAGTCTGTACACTGTTTTGTGGGCAAAAAGCAAAGAAGGAATCACTCATCAAAACTCTTTACCTATTCAAGCATATAAAGAATGTGAAGATCAGGTGAAAACAGATGTAGCATGTAGCAAACCACCACAATAG 1080 0.3704 MGEIGPYLAVFIIQLIYSGMTLLSKAVFNGGMKTSVFVFYRQLIGAIVMVPLALIFERKQAVPVTFSFMTIFKIFMLSLLGITLTLNVHGIALSYTSAMLAAAIVNCLPASTFFFAVLLRVEKVNLRTKSGISKIGSVLLCMAGVAILAIYKGPQLPVHHLLSRYHHNNQQHEDHFSYNKKWILGSLLLFLATIMWSLWLVLQAQLLKSYPSKLTFMSIQSLASATQSFFIAIAFERDIEQWKLGWNMRLLAVVYCGTLVTAVAYYLQALVIDKKGPVFPATWNPLSFIIATIGSVLLLGEPVCLGSVLGGILLVLSLYTVLWAKSKEGITHQNSLPIQAYKECEDQVKTDVACSKPPQ 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01360 359 PANTHER WAT1-RELATED PROTEIN 5 337 - -
Tsu07g01360 359 Pfam EamA-like transporter family 7 133 IPR000620 GO:0016020|GO:0016021
Tsu07g01360 359 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020|GO:0016021
Tsu07g01360 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 152 - -
Tsu07g01360 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 326 - -
Tsu07g01360 359 PANTHER WAT1-RELATED PROTEIN 5 337 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01360 Tsu-Chr7 11971986 11975423 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01360 6 256 Nodulin-like Gene Family AT5G64700 54.475 5.83e-81 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01360 - - vun:114162763 450.284