Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01348 ATGGAATGTGATTGTGATTTTGAAGGCAAATTAATAGGAGaattaaacaacaaaaactaTTACTATCTTTTAGTATCCAAAATTGGACAAGGTTCTTCCTCCATAGTCTGGAAAGCTCAACAAATACCCACTGGCCAACATGTTGCAGTCAAGCAAATCTTTCTCTCCAAACTCAACTCTCGCCTTAAAGCTTCCTTAGACtgtgaaatcaattttttgtcTTCTGTTAACCATCCCAATATTATTCACCTTCTTCACTTCTTTCAGGGTGATGGATGTGTTTATTTAGTTCTTGAGTTTTGTGCTGGAGGGAGTTTGGCTTCTTATATTCGTTGCCATGGAAGAGTTCAACAACTAACCGCTAGAATATTCATGCAGCAACTTGGATCTGGTCTAAAAGTACTACGCTCTCATGGCATTATTCATAGAGACTTAAAACCCGAGAACATTTTGCTGTCAAGTCATGGGGCCAATGCAGTGCTAAAGATATCTGATTTTGGTCTCTCAAGAACTGTACGCCCTGGTGAGTATGTTGAGACAGTTTGTGGAACTCCATTATACATGGCTCCTGAAGTTCTTCAGTTCCAAAAATATGATTACAAGgCAGACATGTGGAGTGTTGGGGCAATTCTTTTTGAGCTTCTAAATGGTTATCCACCTTTTAATGGTAGAAATAATGTTCAGGTGTTGAAAAACATCAGATCCTGTACCTCTCTTCCATTTTGTCCATTGATTCTTTCAGGATTGGATCCTTCCTGTCTTGATATTTGTTCAAGACTACTATGCTTAAATCCAGTGGAGCGCCTTTcttttgatgaattttatttGCATAGCTTTCTACGAGGATAA 849 0.3675 MECDCDFEGKLIGELNNKNYYYLLVSKIGQGSSSIVWKAQQIPTGQHVAVKQIFLSKLNSRLKASLDCEINFLSSVNHPNIIHLLHFFQGDGCVYLVLEFCAGGSLASYIRCHGRVQQLTARIFMQQLGSGLKVLRSHGIIHRDLKPENILLSSHGANAVLKISDFGLSRTVRPGEYVETVCGTPLYMAPEVLQFQKYDYKADMWSVGAILFELLNGYPPFNGRNNVQVLKNIRSCTSLPFCPLILSGLDPSCLDICSRLLCLNPVERLSFDEFYLHSFLRG 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01348 282 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1T 27 275 - -
Tsu07g01348 282 ProSiteProfiles Protein kinase domain profile. 22 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01348 282 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Tsu07g01348 282 SMART serkin_6 22 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01348 282 SUPERFAMILY Protein kinase-like (PK-like) 19 281 IPR011009 -
Tsu07g01348 282 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 27 275 IPR045269 GO:0004674|GO:0006914
Tsu07g01348 282 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Tsu07g01348 282 Gene3D Transferase(Phosphotransferase) domain 1 14 282 - -
Tsu07g01348 282 Pfam Protein kinase domain 24 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01348 Tsu-Chr7 11864513 11866676 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01348 22 281 CBL-interacting serine-threonine protein kinases AT1G01140 36.803 1.71e-46 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Tsu07g01348 Pkinase 2.7e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01348 - - lja:Lj1g3v1289070.2 461.84