Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01345 ATGAGTTTGGCGGACACTGAAAGCTCAGAGGAAGGTTCAGGGCTTCTTGAGCCTCCTGATCCTGATGTTATTGAAATTGATCCCACTAGTCGATACCTTAGGTATAAGGAAGTAATTGGCAAAGGAGCTTTCAAGACTGTTTATAAGGCATTTGATGAAATCACGGGTCTTGAAGTTGCGTGGAGCCAAGTTCGGATCGATGAGGTATTACAATCACCAGGTGACCTAGAAAGGCTGTATTCAGAAGTGCATCTGTTGAGGTCTTTGAAGCATAGTAACATTGTAAGGTTCTACAATTCATGGATTGATGACAAGCACAGGAATGTTAACATGATTACTGAGTTGTTCACCTCAGGGAGCCTCAGACAGTACCGTAAGAAACACAAGAAGGTTGATATGAAAGCTGTTAAAGGATGGGCAAGACAGATTTTAATGGGTTTAATCTACCTCCACAATCACAACCCACCTATTATACATAGAGATCTCAAGTGTGATAACATATTTATAAATGGTCACCAAGGAGAAGTTAAGATTGGAGATTTGGGGTTGGCAACTCTCTTGAAGCAGAATAATGCCAAGAGTGTAATTGGAACCCCGGAGTTTATGGCGCCTGAACTGTACGATGAAAGTTATAATGAATTAGCTGACATATATTCTTTTGGGATGTGCATGCTGGAGTTGGCTACTTCTGAGTATCCTTACAGAGAATGTAGAAATTCTGCTCAGATATACAAAAAAGTTTCATCTGGCATAAAGCCAGTTTCTCTTTCTAAAATCAAAGATCCagaaataaaatcatttatTGAGAAATGTCTTGTCCCAGCATCTCAAAGATTGTCAGCAAAGGAGCTTCTGATGGACCCTTTTCTTGAAGTGAATGTTTCAATAAGGAATCGTCCTCTTCCATTACCAGATATTGTTCTTCCTAAATACGGAGGCTTTGAAAATCGTTGTGTGATGTCGGAAGGTCCTGCTAGTGCACGTATTGGATCCATTTCAAAGGATCTTGGAGATACTAGTGAGCAACCATTGATTACTGTATTTTATAATTCTAACGATGATGCACATGCACCACCTTCTCCATGTGTTGAGATACGAAGGTTGATGGGAGGTGATAGATTTTTTCTCAAAGGTGAAGAAAATGACGTGAACTCTGTATCATTAGTTCTCCGGATAACTAATCAAGGCGGGCGAGCAAGAAATATCCATTTCATATTCTACCTCGATACTGATACAGCCATCTCAGTGTCAAGTGAAATGGTTGAGCAACTTGAACTTACTGAGCACAATGTTAAATTCATTGCCGAGTTGATTGATTTGTTATTGGCAACATTGGTTCCTGATTGGAAACCTTGTGTAGCGATTGATCATTTAATTTCTCCAAATGGTAAACGAACTCATCTGAACCTACAGAAACAAGACCCGCAATTgccaaaatacaaaataagttCAGTGGATTCTAGCGATATTGTGGCTGAATATTTAGGTCCCTCAACATCACATGACAGATTGGCTGAAAAAGAAAACAGTGATAATACgattttttatgatgttctaTCCCATGCAAACATTGGTTTCCAAAGAACAACAAAGACAGATGATATGTATTCTGCGACATCTTACGCTTCGGCAACATCTGATTTCAATGATAGGAATTATTCTACAGTTTCATTCGTGTCTGCTAATTCAGGATTGACAGATTTCAGCTTACCTACAGTGAACGGATGGAGTCAATCCTCACTTGCATCTGAAATTGGGGCATCCTCTGATAGAAAGACCAAGGTTCCGTGCTTGGAAATCAACAATTGTCCCCTTAGTACTTCCTCATATGAAACTGAGGATGAGTTGAGAATAGAGTTAGAGAAGATTGAACGGCAATATCAAGACGCAATAAGGGATTTATCTAAAAGAAGATACGATGCCATCATGGAGACCAAAAAGAGGCTGtcactaaaaaatacaatcatagATTAA 1974 0.383 MSLADTESSEEGSGLLEPPDPDVIEIDPTSRYLRYKEVIGKGAFKTVYKAFDEITGLEVAWSQVRIDEVLQSPGDLERLYSEVHLLRSLKHSNIVRFYNSWIDDKHRNVNMITELFTSGSLRQYRKKHKKVDMKAVKGWARQILMGLIYLHNHNPPIIHRDLKCDNIFINGHQGEVKIGDLGLATLLKQNNAKSVIGTPEFMAPELYDESYNELADIYSFGMCMLELATSEYPYRECRNSAQIYKKVSSGIKPVSLSKIKDPEIKSFIEKCLVPASQRLSAKELLMDPFLEVNVSIRNRPLPLPDIVLPKYGGFENRCVMSEGPASARIGSISKDLGDTSEQPLITVFYNSNDDAHAPPSPCVEIRRLMGGDRFFLKGEENDVNSVSLVLRITNQGGRARNIHFIFYLDTDTAISVSSEMVEQLELTEHNVKFIAELIDLLLATLVPDWKPCVAIDHLISPNGKRTHLNLQKQDPQLPKYKISSVDSSDIVAEYLGPSTSHDRLAEKENSDNTIFYDVLSHANIGFQRTTKTDDMYSATSYASATSDFNDRNYSTVSFVSANSGLTDFSLPTVNGWSQSSLASEIGASSDRKTKVPCLEINNCPLSTSSYETEDELRIELEKIERQYQDAIRDLSKRRYDAIMETKKRLSLKNTIID 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01345 657 CDD STKc_WNK 31 290 - -
Tsu07g01345 657 Pfam Protein kinase domain 35 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01345 657 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 386 439 IPR024678 GO:0004674|GO:0005524
Tsu07g01345 657 ProSiteProfiles Protein kinase domain profile. 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01345 657 SUPERFAMILY Protein kinase-like (PK-like) 34 349 IPR011009 -
Tsu07g01345 657 SMART serkin_6 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01345 657 MobiDBLite consensus disorder prediction 1 23 - -
Tsu07g01345 657 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 4 653 - -
Tsu07g01345 657 Gene3D Phosphorylase Kinase; domain 1 19 114 - -
Tsu07g01345 657 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 653 - -
Tsu07g01345 657 Gene3D - 384 452 - -
Tsu07g01345 657 Gene3D Transferase(Phosphotransferase) domain 1 116 297 - -
Tsu07g01345 657 Coils Coil 613 633 - -
Tsu07g01345 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01345 Tsu-Chr7 11849514 11853165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01345 133 510 MAP Kinase Kinase Kinase AT1G49160 62.597 1.95e-164 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Tsu07g01345 Pkinase 7.3e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01345 K08867 - gmx:121175054 924.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01345 07 11849514 11853165 Tsu07g01345 07 11849514 11853165 ECH
Tsu02g00682 02 5786298 5790023 Tsu07g01345 07 11849514 11853165 PCT