Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01327 ATGGCCGAACCAAAATTGATTCCAGGGTTTCGGTTTCATCCCACTGATGTTGAGCTCGTTATGTATTTTCTCAAGAGGAAGATTATGGGTAGAAAATTCCCTTTTGATGTCATTCCTGAACTTGACATTTACAAGTACGCTCCATGGGATCTACCAGATAAATCTTTGCTCAAAAGTGGCGATTTGAAATGGTACTTCTTTAGCCCTACAGGAAAGAAATATTCCATTGGAGGGAGGATGAATCGAGCGACGGAGATTGGGTACTGGAAGACTACGGGGAAGGATAGATCAATTCAACATGACAATCAAGTGGTGGGGATGATAAGAACCCTGGTGTTTCACATTGGAAAAGCTCATAAAGGAGACCGAACTGACTGGGTTATGCATGAATTCAGACTTGATGACAAATACTTAGCTGACAAAGGCATTCCACAGAGTTCCTATGTGATTTGCAGGGTATTTCAAAAGGAAGGTCCTGGTCCCAGGAATGCTGCACAGTATGGAAAACCATTTAATGAGAAAGACTGGGATAGTGAAGAGGAAATTGATTGTGTACAAGCTGTCCCTGTTGCTGTTGTGTCTGCACCAGCTCCTATCTCAAGCCATATTTCTGCCGCAAATGACATGCATCCATCTGCAAGTGGATGCATTGGACCGACCCCTGTATCATGTCTATCAAGATTGATGCCCTCTGGCTTGGTACAGCCTTCAGCTCCAAGCAATCAAGTTGACGACGGCATTTTATCCATGCTTAATATTTTCAAAGAGGATAATACATTGGCCCGGAATGGAAACAGCGAATCTGAGAAGGTTGGTAGTCCTGGTCAGGCAAACAATGCTGAAGGTGCACCTTATTTAGATCCAAATGCGATTTTTGACGAGTTGGGAGATATTCACAGCTTGGTTGGATTGGATGAAGGAGGCGGCTTTTCATATGGCCAAAaagatgaatataccaaaaatGAAATGCTTTCTAGTGACGACCTCTCTTTGTTTCACGACCCCCATGATTTTCTGGAGTTGAATGACCTAGAGGTGCCATTATTCTAG 1050 0.4276 MAEPKLIPGFRFHPTDVELVMYFLKRKIMGRKFPFDVIPELDIYKYAPWDLPDKSLLKSGDLKWYFFSPTGKKYSIGGRMNRATEIGYWKTTGKDRSIQHDNQVVGMIRTLVFHIGKAHKGDRTDWVMHEFRLDDKYLADKGIPQSSYVICRVFQKEGPGPRNAAQYGKPFNEKDWDSEEEIDCVQAVPVAVVSAPAPISSHISAANDMHPSASGCIGPTPVSCLSRLMPSGLVQPSAPSNQVDDGILSMLNIFKEDNTLARNGNSESEKVGSPGQANNAEGAPYLDPNAIFDELGDIHSLVGLDEGGGFSYGQKDEYTKNEMLSSDDLSLFHDPHDFLELNDLEVPLF 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01327 349 SUPERFAMILY NAC domain 3 156 IPR036093 GO:0003677|GO:0006355
Tsu07g01327 349 PANTHER PLANT NAC DOMAIN PROTEIN 243 342 - -
Tsu07g01327 349 PANTHER PLANT NAC DOMAIN PROTEIN 1 231 - -
Tsu07g01327 349 MobiDBLite consensus disorder prediction 263 285 - -
Tsu07g01327 349 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Tsu07g01327 349 Gene3D NAC domain 15 158 IPR036093 GO:0003677|GO:0006355
Tsu07g01327 349 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Tsu07g01327 349 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 243 342 - -
Tsu07g01327 349 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01327 Tsu-Chr7 11616651 11620998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01327 1 258 NAC Transcription Factor Family AT5G64060 48.201 8.95e-88 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tsu07g01327 NAM 9.8e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01327 - - adu:107470479 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01327 07 11616651 11620998 Tsu07g01327 07 11616651 11620998 ECH