Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01319 ATGCCCACGTGGTGGGGTAAAAAATCAACCAAGTCCAAAGACCTCGAGTCACGTGGCGGCAGCAGCACCACCACTGGCAGCGGCAGCAGCAACGGCGGCGGTGTActtcatttcaatttcaacaaatCTCCGATCAGAAACggttattataataataataaacatgaAAACCCTAACGATGGTTTGAATTTTAGAAATTCTCCCAGATCTAGTAGAGATTTCACTCCTTCAAGTGATTCTATAGGTCTTCCTTTGCCCCGTCCTTCAAGTGATTCTACACAAAGCTTTAGCAATGATCAAGGGAATACTATTACTTTTGGATCTGCTTCTGTTTCTGGTGGTTCAAGCATTAGCTCCAATGCTTCTTCTGATGATCCTTCAACTTCTAATTCTCAGATTAATACCGCTAGAGGACAATCTGAAACAAAGTTCAATGTGAGGCCTAAAAGCCCAGGACCTGGGTTGAGAGGGCCTACCAGTCCAACATCACCTCTTCATGCAAGGGTGCATGTTTTGAGTCTCGACTCACCTACAGGCAGGCAAGAAGATGGAAGGAGTGAATGTCATCCATTGCCTCTTCCACCAGGCTCTCCAAGTAGTCCTTCTCTTCCCAATAGCACGAGACCAAATGGACTGATAGAAAACAGTACCGCTAATCGTGGCAGGTGGAAGAAAGGAAAACTTCTAGGTCGGGGAACATTTGGGCACGTTTACTTGGGATTCAATAGTGAAAGTGGACAATTGTGTGCAATAAAAGAAGTCAGGGCTGTCGGTGATGATCAAACCTCGAAAGAGTGCCTCAAACAACTTAATCAGGAGATAGATTTGCTGAGTCAGCTTTCACATCCAAACATTGTTCAATACCATGGAAGTGATATGGGAGAAGAAACACTTTCTGTTTACTTGGAATATGTCTCTGGAGGTTCTATTCATAAGTTACTTCAGGAATATGGGTCCTTCAAGGAACCTGTCATCCAAAATTATACCAGGCAGATTCTCTCTGGACTTTCCTATCTTCATTCGAGAAATACAGTGCATAGGGATATTAAAGGGGCGAACATACTAGTTGATCCTAATGGTGAAATCAAGTTGGCGGACTTTGGAATGGCTAAACATATAAATGCTTCTTCATCAATGCTTTCTTTCAAAGGAAGCCCACACTGGATGGCGCCAGAGGTTGTAATGAATTCAAATGGCTATAGTCTTCCTGTTGATATTTGGAGCTTGGGATGCACAATTCTTGAAATGGCAACATCAAAGCCTCCTTGGAGTCAGTATGAAGGGGTGCGTGCGATATTGGCTATTTTGAACCAGCATTCATTTACATATTTGTTGTGA 1338 0.4223 MPTWWGKKSTKSKDLESRGGSSTTTGSGSSNGGGVLHFNFNKSPIRNGYYNNNKHENPNDGLNFRNSPRSSRDFTPSSDSIGLPLPRPSSDSTQSFSNDQGNTITFGSASVSGGSSISSNASSDDPSTSNSQINTARGQSETKFNVRPKSPGPGLRGPTSPTSPLHARVHVLSLDSPTGRQEDGRSECHPLPLPPGSPSSPSLPNSTRPNGLIENSTANRGRWKKGKLLGRGTFGHVYLGFNSESGQLCAIKEVRAVGDDQTSKECLKQLNQEIDLLSQLSHPNIVQYHGSDMGEETLSVYLEYVSGGSIHKLLQEYGSFKEPVIQNYTRQILSGLSYLHSRNTVHRDIKGANILVDPNGEIKLADFGMAKHINASSSMLSFKGSPHWMAPEVVMNSNGYSLPVDIWSLGCTILEMATSKPPWSQYEGVRAILAILNQHSFTYLL 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01319 445 Gene3D Transferase(Phosphotransferase) domain 1 220 443 - -
Tsu07g01319 445 SMART serkin_6 223 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01319 445 Pfam Protein kinase domain 224 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01319 445 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 439 - -
Tsu07g01319 445 PANTHER MAP KINASE KINASE KINASE 1 439 - -
Tsu07g01319 445 ProSitePatterns Protein kinases ATP-binding region signature. 229 252 IPR017441 GO:0005524
Tsu07g01319 445 MobiDBLite consensus disorder prediction 203 217 - -
Tsu07g01319 445 ProSiteProfiles Protein kinase domain profile. 223 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01319 445 SUPERFAMILY Protein kinase-like (PK-like) 207 438 IPR011009 -
Tsu07g01319 445 MobiDBLite consensus disorder prediction 16 37 - -
Tsu07g01319 445 MobiDBLite consensus disorder prediction 1 217 - -
Tsu07g01319 445 MobiDBLite consensus disorder prediction 44 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01319 Tsu-Chr7 11560992 11567203 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01319 1 437 MAP Kinase Kinase Kinase AT1G53570 57.330 2.30e-155 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tsu07g01319 Pkinase 2.8e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01319 K04421 - gmx:100813122 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01319 07 11560992 11567203 Tsu07g01319 07 11560992 11567203 ECH