Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01318 ATGGATTCCAAAAAGCTTCCTAGAAAACCTAAACACGAACGCCGTGATGCTCTCAAGCTCTTCAATTACGACGCCCAATCATCTTTCTCCTCTTTCGACTCATCTAGTTCTAGACCTAGTTCAGTCTACACGGACTTATACGAACGTGAATCGCTCATATCTTCAATTACACGCAGGCAAGAAGATACTGAATGTTATCCATTGCCTCTTCCACCAGGCTCTCCAACTACTCCTCCTCTTCCCAATAGCACAAGACCAAATCGATTGATAGAAAACAGTACTGCTAATCGTGGCAGTTGGAAGAAAGGAAAACTTCTAGGTCAGCGCCTCGTGGTGCGACAGGGTCCGAGCACAACGGTGCTCTCACCCTCTCCGGCGTCCCCTGGACAGGAACATTTGGGATTCAATAGTGAAAGTCAACAATTCTGTGCAATAAAGGAAGTCAGTGCTGTTTGTGATGATCAAATCTCAAAAGATTACCTCAAACAATTTAATCAGGAGATAAATTTGCTGAGTCAGCTTTCACATCCAAACATTGTTCAATACCACGGAAGTCATATGGGAAAAGAAACATTTTCCGTTTATTTGGAATATGTCCCTGGAGGTTCTATTCATGAATTACTTCAGGAATATGGGTCCTTCAAGGAGCCTGTCATCCAAAATTATACCAGGCAAATTCTCTCTGGAATTTCCTATCTTCATTCGAGAAATACAGTGCATAGGGATATTAAAGGGGCGAACATACTAGTTGATCCTAATGGTGAAATCAAGTTGGCGGGCTTTGGAATGGCTAAACATATAAATTCTTCTTCCTCAATGCTTTCTTTCAAAGGAAGTCCACACTGGATGGCACCAGAGGTTATAATGAATGTAAATGGCTATAGTCTTCCTGTTGATATTTGGAGCTTGGGATGCACAATTCTTGAAATGGCAACATCAAAGCCTCCTTGGAGTCAGTATGAAGGGGTGGCTGTACTATTTAAAATTAGTAACAGCAAAGACATGCCTGAAATTCCCGACCATCTCTCAAATGATGCAAAGAATTTCATTAGGCTATGCTTGCATCGAGATCCTTCAATTCGCCCTACAGCCCAAATGTTACTAAATCACCCCTTCATTCGAGATCAGTCAGCAACAAAAGCTGCTAATGTCAGAATAACCAGGGATGCTTTTCCGTACATGTTTGATGGAAGCCGGACGCCGGCGTAA 1209 0.4243 MDSKKLPRKPKHERRDALKLFNYDAQSSFSSFDSSSSRPSSVYTDLYERESLISSITRRQEDTECYPLPLPPGSPTTPPLPNSTRPNRLIENSTANRGSWKKGKLLGQRLVVRQGPSTTVLSPSPASPGQEHLGFNSESQQFCAIKEVSAVCDDQISKDYLKQFNQEINLLSQLSHPNIVQYHGSHMGKETFSVYLEYVPGGSIHELLQEYGSFKEPVIQNYTRQILSGISYLHSRNTVHRDIKGANILVDPNGEIKLAGFGMAKHINSSSSMLSFKGSPHWMAPEVIMNVNGYSLPVDIWSLGCTILEMATSKPPWSQYEGVAVLFKISNSKDMPEIPDHLSNDAKNFIRLCLHRDPSIRPTAQMLLNHPFIRDQSATKAANVRITRDAFPYMFDGSRTPA 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01318 402 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 39 401 - -
Tsu07g01318 402 ProSiteProfiles Protein kinase domain profile. 106 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01318 402 MobiDBLite consensus disorder prediction 68 82 - -
Tsu07g01318 402 Gene3D Transferase(Phosphotransferase) domain 1 127 392 - -
Tsu07g01318 402 Pfam Protein kinase domain 134 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01318 402 MobiDBLite consensus disorder prediction 58 86 - -
Tsu07g01318 402 SUPERFAMILY Protein kinase-like (PK-like) 133 386 IPR011009 -
Tsu07g01318 402 PANTHER MAP KINASE KINASE KINASE 39 401 - -
Tsu07g01318 402 SMART serkin_6 100 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01318 Tsu-Chr7 11553039 11557322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01318 53 398 MAP Kinase Kinase Kinase AT1G53570 62.857 2.81e-150 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tsu07g01318 Pkinase 4e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01318 K04421 - gmx:100813122 503.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00650 02 5494246 5498034 Tsu07g01318 07 11553039 11557322 PCT
Tsu02g00452 02 3808670 3812763 Tsu07g01318 07 11553039 11557322 PCT