Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01309 ATGAATCTCCCTTCTCTCACATTCACCCACTATCCCCCTCACCATCTTGTTTCTCCTCTCTATTCTAAACTCCCCACAGCCACTACAAGGGGAAAAAGCGTGGATAATGTTGCAATTGAAGCTCGTAATCTGAATTTCTCATTCACTGTAAAGCAAACCAAGGATGTGACTGTTCTTAGAGATTGTTCAATTTCTATTCCTTCTGGGCAATTTTGGATGCTTCTTGGACCCAATGGGTGTGGGAAATCAACACTCTTGAAGATTTTGGCTGGTCTATTGACTCCAACTTCAGGGATAGTATATGTGAATGAACctaaaagttttgttttccaaaatccAGATCATCAGGTGGTGATGCCTACAGTAGATTCTGACGTTGCATTTGGTCTTGGTAAAATCAATTTGGCTGATGATGAAGTCAGATCTAGGGTGTCACAAGCTTTACATGCTGTTGGTTTATCTGACTACATGAAGAGATCTGTCCAAACTCTGAGTGGTGGTCAGAAGCAGAGGGTTGCCATTGCTGGTGCTCTAGCAGAAGCTTGTAAGGTTCTGTTGTTGGATGAGCTCACAACTTTCCTAGATGAAACTGACCAGGTTGGAGTTATCAAAGCTGTTAGGAACTGTCTGGATACTTCTGAAGACGTTACAGCATTATGGGTCACCCATCGTTTGGAAGAACTAGAGTATGCAGATGGTGCAATCTACATGGAGGATGGAAAGGTAGTCATGCATGGAGATGTGACAAGCATACGGAGTTTCATTGAAGACAGACAATCTGCCTATATTAACCAGATTAATtcttaa 807 0.4102 MNLPSLTFTHYPPHHLVSPLYSKLPTATTRGKSVDNVAIEARNLNFSFTVKQTKDVTVLRDCSISIPSGQFWMLLGPNGCGKSTLLKILAGLLTPTSGIVYVNEPKSFVFQNPDHQVVMPTVDSDVAFGLGKINLADDEVRSRVSQALHAVGLSDYMKRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDETDQVGVIKAVRNCLDTSEDVTALWVTHRLEELEYADGAIYMEDGKVVMHGDVTSIRSFIEDRQSAYINQINS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01309 268 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 29 267 - -
Tsu07g01309 268 Gene3D - 34 267 IPR027417 -
Tsu07g01309 268 Pfam ABC transporter 59 191 IPR003439 GO:0005524
Tsu07g01309 268 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 39 264 IPR003439 GO:0005524
Tsu07g01309 268 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 29 267 - -
Tsu07g01309 268 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 256 IPR027417 -
Tsu07g01309 268 ProSitePatterns ABC transporters family signature. 164 178 IPR017871 GO:0005524
Tsu07g01309 268 CDD ABC_cobalt_CbiO_domain1 40 241 IPR015856 GO:0005524|GO:0016020|GO:0055085
Tsu07g01309 268 SMART AAA_5 68 241 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01309 Tsu-Chr7 11479108 11482309 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01309 39 246 Calmodulin-binding Proteins AT2G36910 29.646 4.28e-20 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01309 - - gmx:100813654 430.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01309 07 11479108 11482309 Tsu07g01309 07 11479108 11482309 ECH