Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01300 ATGAAGAAACAATGGTGTGAGATTGAGGCAATAGGAATCAATTACATGATCCACAGCacacaaacaacaaaacaaccTTTTAAAATCTTTAACAAACCTCCAAAACCAGAAGATGAAGCAAAAGCTGAACAATGGGCAGGTAGTGGAGTTAAGCATGTTCTCAAGAATGTTAATTTCATAGCCAAGCCATGTGAAATTCTTGCAATTGTTGGGCCAAGTGGAGCAGGAAAATCATCACTGCTTGAGATTCTTGCTGGTAGAGTTAGTCCACAAAATGGTGGTTCTATCTTGGTGAATCAAGAGCATATAGATAAATCTCAGTTCAGAAAAATTTCAGGGTATGTTACACAAAAGGATACCCTTTTCCCCTTACTTACAGTTGAAGAAACCATGATGTTTAGTGCAAAACTGAGGCTAAATCTTCCTCAAGAAAAACTATGCTCCAAGGTTGAGTCTCTGATTCAAGAGCTTGGCCTTAGTCATGTTGCTAGGACTAGAGTAGGAGATGGAGATGACAGGGTCCGTGGAATATCCGGTGGTGAGAGGCGCCGACTTTCCGTTGGTGTTGAAGTCATACATGATCCAAAAGTGTTGATTCTTGATGAAGCAACTTCAGGTCTTGACAGTACCTCAGCTTTGCAAATAATTGATATGCTTAAAGGCATGGCTGAATCTAGGGGAAGAACTATAATACTAAGTATTCATCAACCCGGGTTCCGGATAGTGAAGTTGTTCAATTCAATACTGTTGTTAGCCAATGGCCGTGTGTTACATCATGGTACTGTGGATCTGTTGGATGTGAATCTAAGGTTGATGGGTTTAGAGCTTCCTCTTCACGTTAATGTTGTTGAGTTTGCTATGGAATCCATTGAGACCATTCAGCAACAACAGCAAAAATGTCAGCAAGTTCAGGTCGAAGCACAGAAACAATTACTAGGGACAACAATGCGACTAAAGAAAGCTGATGATCAAGGTGAAAGTAGAAGTGGCAAGTTTACTCTACAACAGCTATTTCAACAATCCAAGGTATTTGACATAGAAAACATGATTGTAGGAATGGATTTCTCTTGTCATCATGCTAATTCTAGATTGAGAGAAACTGTGATTCTTGCTCATAGGTTCTCCAAAAACATCATTCGTACAAAAGAGCTGTTTGCATTCAGGACAATTCAGATGCTGGTTTCTGGGCTGATTTTGGGATCCATCTATGGTAATCTCAAAGATGGTATAGTGGGAGCAGAACAAAGGGTTGGTCTATTTGCTTTCATATTAACGTATTTGTTATCAAGCACCATTGAAGCTCTGCCAATTTTTCTGCAAGAAAGGGAGATTCTGATGAAGGAGATTTCAAGTGGAAGCTACAGAGTTTCATCCTATGCTATTGCTAATGGCCTAGTATACTTGCCATTTCTCCTCATACTAGCCATTTTATTCGCAGTGCCACTATACTGGCTTATCGGTCTCAACCAAAATTTCACGGCATTTTTGCACTTTTTGTTGCTAATATGGCTGATTTTGTATACCGCGAATTCGGTTGTGGTATGTTTCAGTGCTCTGGTGCCTAATTTCATCGTTGGAAATTCAGTAATCGCCGGTGTCATTGGTTCATCTTTTTTATTCTCTGGTTACTTCATATCCAATCATGACATTCCGAAGTACTGGATTTTCATGCATTATTTGTCTCTATTTAAGTATCCTTTCGAAGGTTTTCTAATAAATGAGTTCTCCAACTCAAAGAAGTGCTTGGAGTACATGTTTGGGGCATGTGTGATGAGGGGAGAGGATATACTTAAAGAAGAAGGGTATGGAGATACAGATGCTCACAGAGTGTCAACTTCTGAAAACCATGGTGATTCTCAAAGAGGGTTCACATGTCTTGTACTTTTCTGCGGATAG 1896 0.3935 MKKQWCEIEAIGINYMIHSTQTTKQPFKIFNKPPKPEDEAKAEQWAGSGVKHVLKNVNFIAKPCEILAIVGPSGAGKSSLLEILAGRVSPQNGGSILVNQEHIDKSQFRKISGYVTQKDTLFPLLTVEETMMFSAKLRLNLPQEKLCSKVESLIQELGLSHVARTRVGDGDDRVRGISGGERRRLSVGVEVIHDPKVLILDEATSGLDSTSALQIIDMLKGMAESRGRTIILSIHQPGFRIVKLFNSILLLANGRVLHHGTVDLLDVNLRLMGLELPLHVNVVEFAMESIETIQQQQQKCQQVQVEAQKQLLGTTMRLKKADDQGESRSGKFTLQQLFQQSKVFDIENMIVGMDFSCHHANSRLRETVILAHRFSKNIIRTKELFAFRTIQMLVSGLILGSIYGNLKDGIVGAEQRVGLFAFILTYLLSSTIEALPIFLQEREILMKEISSGSYRVSSYAIANGLVYLPFLLILAILFAVPLYWLIGLNQNFTAFLHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVIAGVIGSSFLFSGYFISNHDIPKYWIFMHYLSLFKYPFEGFLINEFSNSKKCLEYMFGACVMRGEDILKEEGYGDTDAHRVSTSENHGDSQRGFTCLVLFCG 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01300 631 Pfam ABC-2 type transporter 368 575 IPR013525 GO:0016020|GO:0140359
Tsu07g01300 631 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 264 IPR027417 -
Tsu07g01300 631 ProSitePatterns ABC transporters family signature. 177 191 IPR017871 GO:0005524
Tsu07g01300 631 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 34 278 IPR003439 GO:0005524
Tsu07g01300 631 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 602 - -
Tsu07g01300 631 SMART AAA_5 63 255 IPR003593 -
Tsu07g01300 631 Pfam ABC transporter 54 205 IPR003439 GO:0005524
Tsu07g01300 631 CDD ABCG_EPDR 45 260 - -
Tsu07g01300 631 Gene3D - 44 319 IPR027417 -
Tsu07g01300 631 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 1 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01300 Tsu-Chr7 11420383 11422360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01300 53 265 Calmodulin-binding Proteins AT2G36910 25.806 1.36e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01300 K05681 - gmx:121172640 866.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01300 07 11420383 11422360 Tsu07g01300 07 11420383 11422360 ECH