Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01281 ATGTCTGGAACTACCGGAAAGGGGAAGAAGAGGGACGATCACGACACCGCTTCCGACGGCGACGCTGAAGCTCACGCGCCTCCTAAGAAGTCTCTCAAGAAAGATTCCGACAAGGATAATAAATCTGATGACATAATCATAGCAGAGATTGCCAAGAACAGGAGGGTTACTGTCAGGACTTGGCAGGATAAGGTTTGGGTAGACATTCGTGAATTTTATGAAAAAGATGGCAAGCAATTACCTGGTAAAAAAGGTATTGCATTGAGCAAGGATCAGTGGATTGTGCTTCGTGATCACTTTGCAGAAATTGACAAGGCAGTCCAAGAGCTGTCTTGA 336 0.4554 MSGTTGKGKKRDDHDTASDGDAEAHAPPKKSLKKDSDKDNKSDDIIIAEIAKNRRVTVRTWQDKVWVDIREFYEKDGKQLPGKKGIALSKDQWIVLRDHFAEIDKAVQELS 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01281 111 MobiDBLite consensus disorder prediction 1 40 - -
Tsu07g01281 111 PANTHER BNAC09G47220D PROTEIN 7 111 - -
Tsu07g01281 111 Pfam Transcriptional Coactivator p15 (PC4) 49 99 IPR003173 GO:0003677|GO:0006355
Tsu07g01281 111 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 7 111 IPR045125 GO:0003713|GO:0060261
Tsu07g01281 111 SUPERFAMILY ssDNA-binding transcriptional regulator domain 47 110 IPR009044 GO:0003677|GO:0006355
Tsu07g01281 111 Gene3D Transcriptional Coactivator Pc4; Chain A 34 111 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01281 Tsu-Chr7 11164480 11166905 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Tsu07g01281 PC4 1.7e-22 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01281 K25815 - fve:101304416 128.257