Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01264 atGCAGGGTGAATTAGAATTACCACCTGGTTTCAGATTTCATCCAACTGATGAAGAACTGGTGAATCATTACTTGTGTAGGAAATGTGCTGGTCAATCAATTTCTGTTCCTGTTGTCAAAGAAGTTGATTTGTATAAGTTTGATCCATGGCAGCTTCCTGAAATGGGATACCAAAGTGAGAAAGAATGGTACTTTTTCTCTCCGAGGGATCGGAAATACCCGAATGGTTCGCGGCCTAATCGGGCTGCGGGAAGTGGTTATTGGAAAGCTACCGGAGCTGATAAACCGATCGGGAAATTGAAACCCATGGGGATTAAAAAGGCGCTGGTTTTCTACGCCGGTAAAGCGCCTAAAGGAGTGAAAACTAATTGGATTATGCATGAATATCGTCTTGCAAACGTTGATCGATCTGCCGGCAAGAAAAATAACTTAAGGCTTGATGATTGGGTGTTATGTAGAATCTACAACAAGAAAGGAAAGATTGAGAAATTCAACACTAACAACACACCAAAGGTTCAAAATTTCTATGAGcatgaagaagaacaagaacatGAGATGAAGCcagaaattaagaaattaggAAACTACCAATTGTACATGGACACATCAGATTCAATTCCAAAGCTAAACACAGACTCAAGCAGTTCAGGACACGTGGTTTCACCAGATATCACATGTGACAGAGAGGTTCAAAGTGAACCAAAATGGAATGAATTTGGAATACAGCTGGATGACACGTTTGATTTTCAGTTCAATTACTTGGAAAATGCACTTTCTTTTGATTATGAAGATGACCCTTTTGGGACCAATGATCAATACCAAATCAACCAGCTTTCACCATTACAAGACATGTTCATGTTCCAACAAAAACCATTTTGA 879 0.3811 MQGELELPPGFRFHPTDEELVNHYLCRKCAGQSISVPVVKEVDLYKFDPWQLPEMGYQSEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKLKPMGIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSAGKKNNLRLDDWVLCRIYNKKGKIEKFNTNNTPKVQNFYEHEEEQEHEMKPEIKKLGNYQLYMDTSDSIPKLNTDSSSSGHVVSPDITCDREVQSEPKWNEFGIQLDDTFDFQFNYLENALSFDYEDDPFGTNDQYQINQLSPLQDMFMFQQKPF 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01264 292 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Tsu07g01264 292 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Tsu07g01264 292 Gene3D NAC domain 16 162 IPR036093 GO:0003677|GO:0006355
Tsu07g01264 292 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Tsu07g01264 292 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 5 263 - -
Tsu07g01264 292 PANTHER NAC TRANSCRIPTION FACTOR 56 5 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01264 Tsu-Chr7 11044060 11045814 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01264 1 292 NAC Transcription Factor Family AT1G01720 62.791 1.75e-123 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tsu07g01264 NAM 1.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01264 - - gmx:100779770 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01264 07 11044060 11045814 Tsu07g01264 07 11044060 11045814 ECH
Tsu02g00614 02 5169474 5171280 Tsu07g01264 07 11044060 11045814 ECH