Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01263 ATGAAGTTAGAAAAATTGGGATTCTTCATTGTTCTACTCTTCTTGAGCTCATCTACTTCTTTAGCTTGGTTTGGTAatagcaaaaacaaaatttcaacttCAAATGGAAGAAACTCAATTCTTCCATATGAACAatcctcttcatcatcatcgtcgtcgTCGCCGCCTTCATTCTTAAACCGTTTTCGTTCTGGTTCATCAGTCGTGTTCCCAGTTCACGGAAATGTTTACCCTGTTGGGTTTTATAATGTGACTCTTAGCATTGGGCACCCACCAAGGCCATATTTTCTTGACATTGACACGGGTAGTGACCTAACATGGCTTCAATGTGATGCTCCTTGCTCCCGTTGCTCTCAAACACCCCATCCGCTTTACCGGCCTAGCAATGACTTAGTCCCTTGCAGACATCCCATGTGTGCATCTGTGCATCAGACGAATAACTATGACTGTGAAGTCGAGCATCAGTGTGATTATGAAGTCGAGTATGCCGATCATTACTCATCCCTTGGTGTACTTGTTAATGATGTCTATGTTCTCAACTTTACAAATGGGGTCCAACTTAAAGTTCGTATGGCACTTGGATGTGGATATGATCAAATTTTTCCAGATTCGTCCTACCACCCCATAGATGGAATGCTTGGCCTTGGCAGGGGAAAATCCAGCTTGATATCACAGTTGAATAATCAGGGTTTGGTGAGAAATGTTGTTGGACATTGTTTGAGTGCACAAGGAGGAGGATACATCTTCTTTGGAGATGTATATGATTCTTCTCGATTGGCTTGGACTCCAATGTCATCAAGAGATTCCAAACATTACTCAGCAGGGGCAGGTGAACTCACTTTTGGAGGGAAGAGGACTGGGTTTGGAAACCTTCTTGCTGTTTTCGACACCGGGAGTTCTTACACTTACTTCAACTCTAACACTTATCAAGCACTAATTTCTTGGTTGACGAAGGAATTAGCTGGAAAGCCCATAAAAGAAGCACCCGAAGACCAAACTCTCCCTCTGTGTTGGTATGGAAAAAGACCTTTCAGAAGTGTATATGAAGTCAGAAAATACTTCAAGCCTATTGCGCTCAGTTTCCCGAGCAGTGGGAAAATAAAAGCCCAATTTGAAATCCCTCCTGAAGCATATCTGATTATTTCGAACATGGGAAATGTTTGCTTGGGTATTCTAAACGGCTCTGAAGTAGGAATGGAGGGTCTGAACCTAATCGGAGACATATCCATGCTAGACAAAGTGATGGTATTTGACAATGAGAAGCAGTTGATCGGTTGGGCTCCGGCAGATTGTAACCGAGTTCCAAAGTCCAGAGATGTCAGCATTTGA 1329 0.4146 MKLEKLGFFIVLLFLSSSTSLAWFGNSKNKISTSNGRNSILPYEQSSSSSSSSSPPSFLNRFRSGSSVVFPVHGNVYPVGFYNVTLSIGHPPRPYFLDIDTGSDLTWLQCDAPCSRCSQTPHPLYRPSNDLVPCRHPMCASVHQTNNYDCEVEHQCDYEVEYADHYSSLGVLVNDVYVLNFTNGVQLKVRMALGCGYDQIFPDSSYHPIDGMLGLGRGKSSLISQLNNQGLVRNVVGHCLSAQGGGYIFFGDVYDSSRLAWTPMSSRDSKHYSAGAGELTFGGKRTGFGNLLAVFDTGSSYTYFNSNTYQALISWLTKELAGKPIKEAPEDQTLPLCWYGKRPFRSVYEVRKYFKPIALSFPSSGKIKAQFEIPPEAYLIISNMGNVCLGILNGSEVGMEGLNLIGDISMLDKVMVFDNEKQLIGWAPADCNRVPKSRDVSI 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01263 442 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 293 304 IPR001969 GO:0004190|GO:0006508
Tsu07g01263 442 PRINTS Pepsin (A1) aspartic protease family signature 403 418 IPR001461 GO:0004190|GO:0006508
Tsu07g01263 442 PRINTS Pepsin (A1) aspartic protease family signature 88 108 IPR001461 GO:0004190|GO:0006508
Tsu07g01263 442 PRINTS Pepsin (A1) aspartic protease family signature 293 304 IPR001461 GO:0004190|GO:0006508
Tsu07g01263 442 Gene3D Acid Proteases 57 251 IPR021109 -
Tsu07g01263 442 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 5 436 - -
Tsu07g01263 442 Gene3D Acid Proteases 252 435 IPR021109 -
Tsu07g01263 442 Pfam Xylanase inhibitor C-terminal 293 427 IPR032799 -
Tsu07g01263 442 Pfam Xylanase inhibitor N-terminal 82 252 IPR032861 -
Tsu07g01263 442 SUPERFAMILY Acid proteases 74 434 IPR021109 -
Tsu07g01263 442 PANTHER ASPARTYL PROTEASES 5 436 IPR001461 GO:0004190|GO:0006508
Tsu07g01263 442 ProSiteProfiles Peptidase family A1 domain profile. 82 427 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01263 Tsu-Chr7 11026588 11029520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01263 64 437 Miscellaneous Gene Families AT1G44130 52.255 2.23e-144 416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01263 07 11026588 11029520 Tsu07g01263 07 11026588 11029520 ECH
Tsu02g00613 02 5153831 5162013 Tsu07g01263 07 11026588 11029520 ECH