Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01252 atgatGCAGGAGgacaagaaaatgaaagtgaagAAAGGATGGCTTGCAGTTCAAGTGGGTttagaggaagaagaagaaggtggtTCTGCATCTCAAAAATTTGTCATACCTATTTCTTATCTTTACCATCCACTTTTCAAGAATCTTCTTGACCAAGCTTATGATGTTTATGGTTACCACACTAATGGTCCTCTCAAACTTCCTTGTTCTGTTGATGATTTTCTTCATCTTCGTTGGCGAATCGAGAAAGAATCAGGTCCTAATCAACATAACCATAACCATCATCAGCATCGTCTTCCTCATGCTCTGATTTTTCACTCTTGTTGA 327 0.3303 MMQEDKKMKVKKGWLAVQVGLEEEEEGGSASQKFVIPISYLYHPLFKNLLDQAYDVYGYHTNGPLKLPCSVDDFLHLRWRIEKESGPNQHNHNHHQHRLPHALIFHSC 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01252 108 Pfam Auxin responsive protein 6 80 IPR003676 GO:0009733
Tsu07g01252 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 8 95 IPR003676 GO:0009733
Tsu07g01252 108 PANTHER SMALL AUXIN-UP RNA-RELATED 8 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01252 Tsu-Chr7 10897784 10898438 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01252 10 82 Calmodulin-binding Proteins AT3G43120 42.466 4.76e-12 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01252 K14488 - mtr:MTR_3g097120 194.512