Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01242 ATGGACAAGTACGAGGCTGTTAAGGATTTAGGTTCTGGCAATTTTGGTGTTGCTAGGCTTATGAGGAACAAAGTTACAAAAGAACTTGTCGCCATGAAATACATCGAACGTGGTAACAAGATTGATGAGAACGTTGCAAGGGAGATCATGAATCATAGGTCGCTTCGGCATCCGAATATAATTCGGTTTAAGGAGGTGATTTTGACTCCAACACATTTAGCAATAGTTATGGAGTATGCAGCTGGAGGAGAGCTCTTTGAGAGGATATGCAATGCTGGCAGGTTCAGTGAAGATGAGGCCAGGTACTTCTTTCAGCAGCTGATCTCAGGTGTCCATTTCTGTCATACCATGCAAATATGCCACAGAGATCTGAAGCTAGAAAATACCCTTTTAGATGGAAGTCCTGCACCCCGCTTAAAAATCTGTGACTTTGGTTATTCGAAGTCATCTTTGCTCCACTCACGGCCCAAATCAACTGTTGGAACACCGGCGTATATAGCACCAGAGGTTCTTTCTAGGCGGGAGTATGATGGAAAGATGGCTGATGTTTGGTCATGCGGGGTGACTCTTTATGTCATGCTGGTTGGAGCATATCCCTTTGAGGATCAGGATGACCCTAAAAATTTTAGGAAAACAATCCAGCGTATCATGGCCATTCAATACAAAATTCCTGATTATGTTCACATATCTCAAGATTGTAGACACCTTATCGCTCGTATATTTGTTGCAAATCCATTGAGGAGAATCTCTATTAAGGAAATCAAGAGCCATCCATGGTTTTTAAAGAATCTCCCAAGGGAGCTAACAGAATCAGCTCAAGCTATGTATTACCAGAGAGAAAATCCAAGCTTTCATCTACAAAGCGTGGACGACGTAATGAAAATCGTCGGAGAGGCAAGAAATCCGCCTCCAGTATCTAGGCCCGTCAAAGGTTTTGGCTgggatggagaagaagatgaagccaCAGAAGAGTTGGAAGCAGAATTGgaggaagaggatgatgaagaagatgagtaTGATAAAAGAGTCAAAGAGGTTCATGCAAGTGGAGAATTCCATATTAGTTAA 1068 0.4036 MDKYEAVKDLGSGNFGVARLMRNKVTKELVAMKYIERGNKIDENVAREIMNHRSLRHPNIIRFKEVILTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVHFCHTMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKMADVWSCGVTLYVMLVGAYPFEDQDDPKNFRKTIQRIMAIQYKIPDYVHISQDCRHLIARIFVANPLRRISIKEIKSHPWFLKNLPRELTESAQAMYYQRENPSFHLQSVDDVMKIVGEARNPPPVSRPVKGFGWDGEEDEATEELEAELEEEDDEEDEYDKRVKEVHASGEFHIS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01242 355 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Tsu07g01242 355 PANTHER SERINE/THREONINE KINASE 2 349 - -
Tsu07g01242 355 Gene3D Transferase(Phosphotransferase) domain 1 80 267 - -
Tsu07g01242 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Tsu07g01242 355 MobiDBLite consensus disorder prediction 317 339 - -
Tsu07g01242 355 Coils Coil 318 342 - -
Tsu07g01242 355 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01242 355 MobiDBLite consensus disorder prediction 340 355 - -
Tsu07g01242 355 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01242 355 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01242 355 SUPERFAMILY Protein kinase-like (PK-like) 1 295 IPR011009 -
Tsu07g01242 355 CDD STKc_SnRK2 3 259 - -
Tsu07g01242 355 MobiDBLite consensus disorder prediction 304 355 - -
Tsu07g01242 355 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2A-RELATED 2 349 - -
Tsu07g01242 355 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01242 Tsu-Chr7 10785513 10789434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01242 3 263 CBL-interacting serine-threonine protein kinases AT4G24400 42.593 6.45e-66 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Tsu07g01242 Pkinase 2.4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01242 K14498 - gmx:547968 644.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01242 07 10785513 10789434 Tsu07g01242 07 10785513 10789434 ECH
Tsu02g00581 02 4900103 4905033 Tsu07g01242 07 10785513 10789434 PCT